RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PITPNM3Q9BZ71 974 aa9.83□□□□□ -0.84
TPM3-210ENST00000368530 ZDHHC6Q9H6R6 413 aa9.83□□□□□ -0.84
TPM3-210ENST00000368530 MBNL1Q9NR56 388 aaKnown RBP9.83□□□□□ -0.84
TPM3-210ENST00000368530 MARCH4Q9P2E8 410 aaPredicted RBP9.83□□□□□ -0.84
TPM3-210ENST00000368530 EMCNQ9ULC0 261 aa9.83□□□□□ -0.84
TPM3-210ENST00000368530 PHTF1Q9UMS5 762 aa9.83□□□□□ -0.84
TPM3-210ENST00000368530 FAM95CA0A1B0GW59 222 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 H3BM21 787 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 NOBOXO60393 691 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CRTAMO95727 393 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 IGSF6O95976 241 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CELA2BP08218 269 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 ALPIP09923 528 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PRSS56P0CW18 603 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 RBMS1P29558 406 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 MAGEA12P43365 314 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ZNF140P52738 457 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 AP1S1P61966 158 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 BCL2L1Q07817 233 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 LAMB3Q13751 1172 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ZNF460Q14592 562 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 NR0B2Q15466 257 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 MYLK3Q32MK0 819 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PRRT3Q5FWE3 981 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 RBM20Q5T481 1227 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 ARMC12Q5T9G4 340 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 KIAA1614Q5VZ46 1190 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CGB2Q6NT52 195 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PIGWQ7Z7B1 504 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PHACTR4Q8IZ21 702 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 EXD3Q8N9H8 876 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 TP53I13Q8NBR0 393 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 CCDC197Q8NCU1 140 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 OR4K2Q8NGD2 314 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 OR2AP1Q8NGE2 309 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 BTN2A2Q8WVV5 523 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 MED8Q96G25 268 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 GPR22Q99680 433 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CCDC3Q9BQI4 270 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 MANSC1Q9H8J5 431 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 BPIFA1Q9NP55 256 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 EVA1BQ9NVM1 165 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 TMEM216Q9P0N5 145 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 SPASTQ9UBP0 616 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 DCDC2Q9UHG0 476 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 RP1P56715 2156 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ANKRD66B4E2M5 251 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PYCARD-AS1I3L0S3 204 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CD3EAPO15446 510 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 SNX3O60493 162 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PLIN3O60664 434 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 EDF1O60869 148 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 MMP20O60882 483 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 TNFSF15O95150 251 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 POP4O95707 220 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 GSRP00390 522 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 C2P06681 752 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 TIMP2P16035 220 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 YPEL5P62699 121 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 SEMA3AQ14563 771 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 TAF1AQ15573 450 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 CHI3L2Q15782 390 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ARMC3Q5W041 872 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 RGS9BPQ6ZS82 235 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 SPATA21Q7Z572 469 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 B3GNT8Q7Z7M8 397 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CILP2Q8IUL8 1156 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 NUDCD3Q8IVD9 361 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CEP97Q8IW35 865 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 WDR36Q8NI36 951 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 GABPB2Q8TAK5 448 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 STYXQ8WUJ0 223 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ISL2Q96A47 359 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 CABS1Q96KC9 395 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 KLHL32Q96NJ5 620 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 UNKQ9C0B0 810 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 NLE1Q9NVX2 485 aaPredicted RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 APOBEC3BQ9UH17 382 aaKnown RBP9.82□□□□□ -0.84
TPM3-210ENST00000368530 TLK1Q9UKI8 766 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 PADI4Q9UM07 663 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 ZNF711Q9Y462 761 aa9.82□□□□□ -0.84
TPM3-210ENST00000368530 SCN8AQ9UQD0 1980 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 CCDC187A0A096LP49 1063 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 A0A1W2PQM1 296 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 C2orf81A6NN90 581 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 A8MX80 341 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 ANKRD65E5RJM6 399 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 FZD6O60353 706 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 DNAJC6O75061 913 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 PGLSO95336 258 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 S1PR4O95977 384 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 PROCP04070 461 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 UGT2B4P06133 528 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 BPGMP07738 259 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 LPOP22079 712 aaPredicted RBP9.81□□□□□ -0.84
TPM3-210ENST00000368530 HADHAP40939 763 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 SLC12A2P55011 1212 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 TAS2R39P59534 338 aa9.81□□□□□ -0.84
TPM3-210ENST00000368530 SNRPD1P62314 119 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms