RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GPS2Q13227 327 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 PRPSAP1Q14558 356 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 IZUMO3Q5VZ72 239 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 TMEM126BQ8IUX1 230 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 CDKL3Q8IVW4 592 aaPredicted RBP15.59■□□□□ 0.09
CKS1B-202ENST00000368436 KLHDC8BQ8IXV7 354 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 NXPE1Q8N323 547 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 OR4E2Q8NGC2 313 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 OR13C4Q8NGS5 318 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 HM13Q8TCT9 377 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 HEXDCQ8WVB3 486 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 ULK4Q96C45 1275 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 DCUN1D1Q96GG9 259 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 PPM1MQ96MI6 270 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 FERMT1Q9BQL6 677 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 OSBPL8Q9BZF1 889 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 FAM8A1Q9UBU6 413 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 CRLS1Q9UJA2 301 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 POMT2Q9UKY4 750 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 MED13Q9UHV7 2174 aa15.59■□□□□ 0.09
CKS1B-202ENST00000368436 PIKFYVEQ9Y2I7 2098 aa15.58■□□□□ 0.09
CKS1B-202ENST00000368436 SPTBP11277 2137 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 IGLV3-16A0A075B6K0 115 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 KCNN4O15554 427 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 PJA2O43164 708 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 DNAJB5O75953 348 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 RBP3P10745 1247 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 ATP1B2P14415 290 aaPredicted RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 POLR2CP19387 275 aaPredicted RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 HADHAP40939 763 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 ARCN1P48444 511 aaKnown RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 EIF3EP60228 445 aaKnown RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 IL10RAQ13651 578 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 GSE1Q14687 1217 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SPA17Q15506 151 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 ZNF658BQ4V348 819 aaPredicted RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 CCDC181Q5TID7 509 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 FBXO38Q6PIJ6 1188 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SARM1Q6SZW1 724 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SNX20Q7Z614 316 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 ACVR1CQ8NER5 493 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 MR1Q95460 341 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 CALR3Q96L12 384 aaKnown RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 PPP1R2P1Q96PQ5 205 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 COPS8Q99627 209 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 FAM96AQ9H5X1 160 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SYTL2Q9HCH5 934 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 MLXIPLQ9NP71 852 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 C1GALT1Q9NS00 363 aa15.58■□□□□ 0.08
CKS1B-202ENST00000368436 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SPENQ96T58 3664 aaKnown RBP15.58■□□□□ 0.08
CKS1B-202ENST00000368436 SLC9B1P1A6NJY1 282 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 MATN2O00339 956 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 LDB2O43679 373 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 KLK3P07288 261 aaPredicted RBP15.57■□□□□ 0.08
CKS1B-202ENST00000368436 RAB40ALP0C0E4 278 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 MSL3P1P0C860 447 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 ITGALP20701 1170 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 RORAP35398 523 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 MLLT10P55197 1068 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 GSDMDP57764 484 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 TMPRSS15P98073 1019 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 PRKAA1Q13131 559 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 KRT33BQ14525 404 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 GPR33Q49SQ1 333 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 ZNF789Q5FWF6 425 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 PLEKHS1Q5SXH7 462 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 DARS2Q6PI48 645 aaKnown RBP15.57■□□□□ 0.08
CKS1B-202ENST00000368436 ATCAYQ86WG3 371 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 DSELQ8IZU8 1212 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 FAM26EQ8N5C1 309 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 CCDC110Q8TBZ0 833 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 ADAMTS17Q8TE56 1095 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 CPT1BQ92523 772 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 SPATA13Q96N96 652 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 TBL1YQ9BQ87 522 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 CHST8Q9H2A9 424 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 OR52A5Q9H2C5 316 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 COG4Q9H9E3 785 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 LUC7LQ9NQ29 371 aaKnown RBP15.57■□□□□ 0.08
CKS1B-202ENST00000368436 SOHLH2Q9NX45 425 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 ZDHHC3Q9NYG2 299 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 PCDHGA9Q9Y5G4 932 aaKnown RBP15.57■□□□□ 0.08
CKS1B-202ENST00000368436 COL12A1Q99715 3063 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 LRRK2Q5S007 2527 aa15.57■□□□□ 0.08
CKS1B-202ENST00000368436 TRBV5-4A0A0C4DH59 114 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CCDC66A2RUB6 948 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 RCCD1A6NED2 376 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CFAP99D6REC4 459 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 H7C0S8 307 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 MEN1O00255 615 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 STK10O94804 968 aaKnown RBP15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CDH3P22223 829 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CTNNA2P26232 953 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 PRDX3P30048 256 aaKnown RBP15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CYLC1P35663 651 aaPredicted RBP15.56■□□□□ 0.08
CKS1B-202ENST00000368436 CD151P48509 253 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 ABRQ12979 859 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 PRAMEF17Q5VTA0 474 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms