RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 GIT2Q14161 759 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 EARS2Q5JPH6 523 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SMG8Q8ND04 991 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 ABHD11Q8NFV4 315 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 CFL2Q9Y281 166 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SETD1AO15047 1707 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SLITRK5O94991 958 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 MSR1P21757 451 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 INHBCP55103 352 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 TPGS1Q6ZTW0 290 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 MMAAQ8IVH4 418 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 OR10H3O60404 316 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 HNRNPA0Q13151 305 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 TSTQ16762 297 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 KLHL26Q53HC5 615 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SPATA20Q8TB22 786 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 KAT5Q92993 513 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 FNDC11Q9BVV2 318 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SMURF1Q9HCE7 757 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 GAKO14976 1311 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 H0YGN5 161 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 SUV39H1O43463 412 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 FAUP35544 74 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 PTPN9P43378 593 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 FCGRTP55899 365 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 HUNKP57058 714 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 MEP1AQ16819 746 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 NAT9Q9BTE0 207 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 TTLL2Q9BWV7 592 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 ALG5Q9Y673 324 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 NFS1Q9Y697 457 aa10.93□□□□□ -0.66
CDC42BPA-205ENST00000366769 TRAV20A0A0B4J274 112 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 OGTO15294 1046 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 GNALP38405 381 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 MAGEA11P43364 429 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 NOMO3P69849 1222 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 NOMO1Q15155 1222 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 BOLLQ8N9W6 283 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SLC44A1Q8WWI5 657 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ASB15Q8WXK1 588 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 RAP2CQ9Y3L5 183 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ABCC6O95255 1503 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 PTGIRP43119 386 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 PIK3R6Q5UE93 754 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 MARC1Q5VT66 337 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 UNC5AQ6ZN44 842 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TUBA1CQ9BQE3 449 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ANKHQ9HCJ1 492 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TAS2R13Q9NYV9 303 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 IKZF2Q9UKS7 526 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CCDC163A0A0D9SF12 145 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TSTD3H0UI37 97 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 BCAS2O75934 225 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 PDK2Q15119 407 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 HYIQ5T013 277 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 RASGEF1CQ8N431 466 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ABCA7Q8IZY2 2146 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 USP6P35125 1406 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 PER2O15055 1255 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 COL6A1P12109 1028 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 S100A10P60903 97 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 HSPA14Q0VDF9 509 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 PRKG2Q13237 762 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SELENOMQ8WWX9 145 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ZNF696Q9H7X3 374 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 MYPNQ86TC9 1320 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SLC30A4O14863 429 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 RASGRP1O95267 797 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ZNF7P17097 686 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 RPL10P27635 214 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 MECP2P51608 486 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CLCN3P51790 818 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CLEC6AQ6EIG7 209 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 OR2T12Q8NG77 320 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CLP1Q92989 425 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 DNAJB4Q9UDY4 337 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SLC7A1P30825 629 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 WDSUB1Q8N9V3 476 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 OR2L8Q8NGY9 312 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CXorf40AQ8TE69 158 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SUSD6Q92537 303 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 ATP13A1Q9HD20 1204 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TIMM13Q9Y5L4 95 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CRB1P82279 1406 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 TRDMT1O14717 391 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 IGSF6O95976 241 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 CYP2A6P11509 494 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SSTR2P30874 369 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 SCN1AP35498 2009 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 H3BNH8 94 aa10.92□□□□□ -0.66
CDC42BPA-205ENST00000366769 DENRO43583 198 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms