RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 AP1S2P56377 157 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 GMFBP60983 142 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 C11orf74Q86VG3 221 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 RASAL3Q86YV0 1011 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZDHHC6Q9H6R6 413 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 FGF19O95750 216 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CAPZA2P47755 286 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 TXNDC5Q8NBS9 432 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CEP295NLQ96MC4 621 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 M0QX08 132 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CHSY3Q70JA7 882 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ANKFN1Q8N957 763 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 HMCESQ96FZ2 354 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 EIF2B4Q9UI10 523 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 PPM1AP35813 382 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ETV4P43268 484 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 PFKPQ01813 784 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 LRRC70Q7Z2Q7 622 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 OR8J3Q8NGG0 315 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 HTRA1Q92743 480 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ITPKCQ96DU7 683 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF382Q96SR6 550 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 RMI1Q9H9A7 625 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM240BA0A1B0GVZ2 78 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 TBL1XO60907 577 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CKMT2P17540 419 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 RPIAP49247 311 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 AP3S2P59780 193 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SMAD3P84022 425 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 TARBP2Q15633 366 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 HKDC1Q2TB90 917 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 FBXL19Q6PCT2 694 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM220AQ7Z4H9 259 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 THG1LQ9NWX6 298 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNHIT2Q9UHR6 403 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SPTLC1O15269 473 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SSNA1O43805 119 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 TSC22D2O75157 780 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCT3P49368 545 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 NIPAL4Q0D2K0 466 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 SEC14L3Q9UDX4 400 aa11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 DDX60LQ5H9U9 1706 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-202ENST00000366764 UNCXA6NJT0 531 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCNDBP1O95273 360 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 GHRHRQ02643 423 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 ANKRA2Q9H9E1 313 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 PRDM5Q9NQX1 630 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 ISPDA4D126 451 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 STC1P52823 247 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 LIX1Q8N485 282 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 MYBPHLA2RUH7 354 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 H3BSA7 217 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 OR6B1O95007 311 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CBSLP0DN79 551 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CBSP35520 551 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 EMX2Q04743 252 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 LCN1P1Q5VSP4 162 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 IL1RAPQ9NPH3 570 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 OGDHLQ9ULD0 1010 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 TIMM22Q9Y584 194 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 U3KQV3 271 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 HDCP19113 662 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 LMO2P25791 158 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 SEMA3AQ14563 771 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF460Q14592 562 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 SNX20Q7Z614 316 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 IRAK3Q9Y616 596 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 BMP7P18075 431 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 KHDRBS2Q5VWX1 349 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 DET1Q7L5Y6 550 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAR1Q8WVX9 515 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 OSGEPL1Q9H4B0 414 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 DPEP3Q9H4B8 488 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 FAM86C2PA6NEL3 165 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 H3BNH8 94 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 ACSL4O60488 711 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CCNB2O95067 398 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 FGBP02675 491 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 BMP2P12643 396 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 GAD2Q05329 585 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 MINDY1Q8N5J2 469 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 CAPN14A8MX76 684 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 IFNGP01579 166 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 RPS14P62263 151 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 KLHL22Q53GT1 634 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 C17orf64Q86WR6 236 aa11.62□□□□□ -0.55
CDC42BPA-202ENST00000366764 MTFMTQ96DP5 389 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms