RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 CCNDBP1O95273 360 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 GCNT3O95395 438 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 POP4O95707 220 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CNPP09543 421 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 SOX3P41225 446 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 TSFMP43897 325 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 KRTAP12-4P60329 112 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 HERV-K104P61576 105 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ICA1Q05084 483 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 RUNX3Q13761 415 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 DRAP1Q14919 205 aaPredicted RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ANKRD1Q15327 319 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ATAD3CQ5T2N8 411 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 GPR157Q5UAW9 335 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CORO6Q6QEF8 472 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 IGFL2Q6UWQ7 119 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 RRM2BQ7LG56 351 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 TIPARPQ7Z3E1 657 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 FAM131BQ86XD5 332 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZFAND4Q86XD8 727 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CCAR1Q8IX12 1150 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CACNA2D3Q8IZS8 1091 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 OR6S1Q8NH40 331 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 RUFY2Q8WXA3 655 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 RUBCNQ92622 972 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 IGSF8Q969P0 613 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 TNIP3Q96KP6 325 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 SMC6Q96SB8 1091 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CHRDL1Q9BU40 450 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 GPN1Q9HCN4 374 aaPredicted RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ACKR4Q9NPB9 350 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 RCC2Q9P258 522 aaKnown RBP0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 CSNK1G3Q9Y6M4 447 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 ARID1AO14497 2285 aa0.81□□□□□ -2.28
RNU4-11P-201ENST00000365287 KANSL1LA0AUZ9 987 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 OR2M5A3KFT3 312 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 SLC33A1O00400 549 aaPredicted RBP0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 KLK10O43240 276 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 TSPAN3O60637 253 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF853P0CG23 659 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 HLA-FP30511 346 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 RIPK4P57078 832 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 IGLV3-21P80748 117 aaPredicted RBP0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 TEFQ10587 303 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 UTF1Q5T230 341 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 KLC3Q6P597 504 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 KIRREL3Q8IZU9 778 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 VANGL1Q8TAA9 524 aaPredicted RBP0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 C11orf45Q8TAV5 145 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 ELP4Q96EB1 424 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF597Q96LX8 424 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 ATF6BQ99941 703 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 CHCHD5Q9BSY4 110 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 GLIS2Q9BZE0 524 aaPredicted RBP0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 TMEM39BQ9GZU3 492 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 SLC28A3Q9HAS3 691 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF581Q9P0T4 197 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 HCN3Q9P1Z3 774 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 GTF3C4Q9UKN8 822 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 WIPI2Q9Y4P8 454 aa0.8□□□□□ -2.28
RNU4-11P-201ENST00000365287 A0A1W2PQ72 361 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 A0A1W2PR80 420 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 A0A1W2PRB8 838 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 IPO5O00410 1097 aaKnown RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 CSTBP04080 98 aaKnown RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 URODP06132 367 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF17P17021 662 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 GNAQP50148 359 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 CLCN4P51793 760 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 CD81P60033 236 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 OS9Q13438 667 aaPredicted RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 TIGD6Q17RP2 521 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 Q1RN00 199 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF805Q5CZA5 627 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 NOTUMQ6P988 496 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 SRLQ86TD4 932 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 CATSPERDQ86XM0 798 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 CCDC13Q8IYE1 715 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 AGAP11Q8TF27 550 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 GCC1Q96CN9 775 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 NUS1Q96E22 293 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 SGK494Q96LW2 274 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF582Q96NG8 517 aaPredicted RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 MAP3K3Q99759 626 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 TDRD1Q9BXT4 1180 aaKnown RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 MIOSQ9NXC5 875 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 LRCH1Q9Y2L9 728 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 NAALAD2Q9Y3Q0 740 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 RIPK3Q9Y572 518 aa0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 DHX57Q6P158 1386 aaKnown RBP0.79□□□□□ -2.28
RNU4-11P-201ENST00000365287 IGHV4-30-2A0A087WSY4 118 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 GAGE10A6NGK3 116 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 MAP2K7O14733 419 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 SH3BGRLO75368 114 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 IGHEP01854 428 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 VTNP04004 478 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 ZNF182P17025 639 aaPredicted RBP0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 CA4P22748 312 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 CDC16Q13042 620 aa0.78□□□□□ -2.28
RNU4-11P-201ENST00000365287 OLIG2Q13516 323 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms