RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 G3BP2Q9UN86 482 aaKnown RBP20.54■□□□□ 0.88
CD47-202ENST00000361309 TMEM150CB9EJG8 249 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 STX7O15400 261 aaKnown RBP20.53■□□□□ 0.88
CD47-202ENST00000361309 AKR1B10O60218 316 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 CST8O60676 142 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 PRAMEF1O95521 474 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 POLBP06746 335 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 CAPN1P07384 714 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 CDKN2BP42772 138 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 VAV2P52735 878 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 PRKAA1Q13131 559 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 TFDP2Q14188 446 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 KRT33BQ14525 404 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 GSE1Q14687 1217 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 KAZNQ674X7 775 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 SLC6A19Q695T7 634 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 DAAM2Q86T65 1068 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 ZC3H18Q86VM9 953 aaKnown RBP20.53■□□□□ 0.88
CD47-202ENST00000361309 ZNF567Q8N184 647 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 ZBTB2Q8N680 514 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 LILRA3Q8N6C8 439 aaPredicted RBP20.53■□□□□ 0.88
CD47-202ENST00000361309 OR1L3Q8NH93 324 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 PRR7Q8TB68 274 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 C1GALT1Q9NS00 363 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 PCMTD2Q9NV79 361 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.53■□□□□ 0.88
CD47-202ENST00000361309 COLEC10Q9Y6Z7 277 aa20.53■□□□□ 0.88
CD47-202ENST00000361309 KLHL33A6NCF5 533 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 MPP3Q13368 585 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 FAM198BQ6UWH4 519 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 MED25Q71SY5 747 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 HPS6Q86YV9 775 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 RHOT2Q8IXI1 618 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 SYTL1Q8IYJ3 562 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 CFAP206Q8IYR0 622 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 TMEM102Q8N9M5 508 aaPredicted RBP20.52■□□□□ 0.88
CD47-202ENST00000361309 SLC29A3Q9BZD2 475 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 ACTR5Q9H9F9 607 aaPredicted RBP20.52■□□□□ 0.88
CD47-202ENST00000361309 GPR83Q9NYM4 423 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 ARL5AQ9Y689 179 aa20.52■□□□□ 0.88
CD47-202ENST00000361309 SNRNP200O75643 2136 aaKnown RBP20.51■□□□□ 0.87
CD47-202ENST00000361309 SYCE3A1L190 88 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 GSAPA4D1B5 854 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 GOLGA6L19H0YKK7 550 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 SGTAO43765 313 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 DDAH2O95865 285 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 CYP2A7P20853 494 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 NDUFS1P28331 727 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 SLC1A1P43005 524 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 PREPP48147 710 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 RRADP55042 308 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 RAPSNQ13702 412 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 TAZQ16635 292 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 PTCHD3Q3KNS1 767 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 BCL7AQ4VC05 210 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 ZNF789Q5FWF6 425 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 GLIS1Q8NBF1 620 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 OR4K2Q8NGD2 314 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 OR8K1Q8NGG5 319 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 PNPLA2Q96AD5 504 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 LINC00615Q96LM1 132 aaPredicted RBP20.51■□□□□ 0.87
CD47-202ENST00000361309 VAT1Q99536 393 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 ASB8Q9H765 288 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 SPTLC3Q9NUV7 552 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 HEBP2Q9Y5Z4 205 aa20.51■□□□□ 0.87
CD47-202ENST00000361309 LRBAP50851 2863 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SRP72O76094 671 aaKnown RBP20.5■□□□□ 0.87
CD47-202ENST00000361309 AGTP01019 485 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 PYGMP11217 842 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 ST6GAL1P15907 406 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 COMTP21964 271 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 VARSP26640 1264 aaKnown RBP20.5■□□□□ 0.87
CD47-202ENST00000361309 ATP1A4Q13733 1029 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SPOCD1Q6ZMY3 1216 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 ACVR1CQ8NER5 493 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 LCN9Q8WX39 176 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 P3H4Q92791 437 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 HAUS1Q96CS2 278 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 C19orf60Q96EN9 201 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 DNAJC7Q99615 494 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SMAD5Q99717 465 aaKnown RBP20.5■□□□□ 0.87
CD47-202ENST00000361309 NRTNQ99748 197 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 CCM2Q9BSQ5 444 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SLC7A5P2Q9GIP4 190 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SRMSQ9H3Y6 488 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 SYTL2Q9HCH5 934 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 RSPH14Q9UHP6 348 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 FKBPLQ9UIM3 349 aa20.5■□□□□ 0.87
CD47-202ENST00000361309 MATN2O00339 956 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 KRT86O43790 486 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 SPOPO43791 374 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 COL8A1P27658 744 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 PRDX3P30048 256 aaKnown RBP20.49■□□□□ 0.87
CD47-202ENST00000361309 LMAN1P49257 510 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 NCF4Q15080 339 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 FERD3LQ96RJ6 166 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 CHP1Q99653 195 aa20.49■□□□□ 0.87
CD47-202ENST00000361309 FICDQ9BVA6 458 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms