RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 C2orf80Q0P641 193 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 ACDQ96AP0 544 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.17
SCAF1-201ENST00000360565 IL12RB2Q99665 862 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 NSUN3Q9H649 340 aaKnown RBP16.08■□□□□ 0.17
SCAF1-201ENST00000360565 KCNK13Q9HB14 408 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 ERGIC3Q9Y282 383 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 TLL2Q9Y6L7 1015 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 KNL1Q8NG31 2342 aa16.08■□□□□ 0.17
SCAF1-201ENST00000360565 ASNA1O43681 348 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 GUCY1B2O75343 617 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 GNAZP19086 355 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 CHST9Q7L1S5 443 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 SERINC5Q86VE9 423 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 C11orf65Q8NCR3 313 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 IGSF8Q969P0 613 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 DERL2Q9GZP9 239 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 YIPF1Q9Y548 306 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 A0A1W2PQ67 120 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 UNCXA6NJT0 531 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 C1QTNF3-AMACRE9PGA6 284 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 SLC35G4P0C7Q5 338 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 SLC11A1P49279 550 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 AGTR2P50052 363 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 TNFAIP8L3Q5GJ75 292 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 LDLRAD1Q5T700 205 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 DEF8Q6ZN54 512 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 AHSA2Q719I0 299 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 C17orf64Q86WR6 236 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 OR4F6Q8NGB9 312 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 WRAP53Q9BUR4 548 aaKnown RBP16.08■□□□□ 0.16
SCAF1-201ENST00000360565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF623O75123 536 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 MTX2O75431 263 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 INHAP05111 366 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 JAK1P23458 1154 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 TALDO1P37837 337 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 CENPAP49450 140 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 CHRNA6Q15825 494 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 CFAP206Q8IYR0 622 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 PIK3C3Q8NEB9 887 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 MCFD2Q8NI22 146 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 AUTS2Q8WXX7 1259 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 MYOCQ99972 504 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 TRIM8Q9BZR9 551 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 RHBGQ9H310 441 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 CD320Q9NPF0 282 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 DNAJB9Q9UBS3 223 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 RAPGEFL1Q9UHV5 662 aa16.08■□□□□ 0.16
SCAF1-201ENST00000360565 FABP3P05413 133 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 IFNGR2P38484 337 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 DAG1Q14118 895 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 GALNT18Q6P9A2 607 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 KBTBD8Q8NFY9 601 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 OLFM1Q99784 485 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 FEM1AQ9BSK4 669 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 ZIM2Q9NZV7 527 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 LRRC14BA6NHZ5 514 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 RGS10O43665 173 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 CLDN7O95471 211 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 ACADMP11310 421 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 G6PDP11413 515 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 VARSP26640 1264 aaKnown RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 CCND3P30281 292 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 TGFBIQ15582 683 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 GPR33Q49SQ1 333 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 MFSD4BQ5TF39 518 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 KLHDC10Q6PID8 442 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 ARMC8Q8IUR7 673 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF483Q8TF39 744 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 FAIM2Q9BWQ8 316 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 IGFLR1Q9H665 355 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 WDR6Q9NNW5 1121 aaKnown RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 BTBD3Q9Y2F9 522 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 LYVE1Q9Y5Y7 322 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 PRR23D1E9PI22 279 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 CBFA2T3O75081 653 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 PRR23D2P0DMB1 279 aaPredicted RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 HPGDP15428 266 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 MAGEA6P43360 314 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 NFKB2Q00653 900 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
SCAF1-201ENST00000360565 TMEM199Q8N511 208 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 HM13Q8TCT9 377 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 MAP4K5Q9Y4K4 846 aa16.07■□□□□ 0.16
SCAF1-201ENST00000360565 TMEM88BA6NKF7 163 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 MAGEB17A8MXT2 336 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 PRKD3O94806 890 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 CLIC3O95833 236 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 PIK3R6Q5UE93 754 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 ADGRG6Q86SQ4 1221 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 OR8D1Q8WZ84 308 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 USP7Q93009 1102 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 TMLHEQ9NVH6 421 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 G3V2L1 256 aa16.06■□□□□ 0.16
SCAF1-201ENST00000360565 RNASEH2AO75792 299 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms