RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 TTLL9Q3SXZ7 439 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 RHBDF1Q96CC6 855 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 ADI1Q9BV57 179 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 PAK6Q9NQU5 681 aaPredicted RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 LATS2Q9NRM7 1088 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 SMOXQ9NWM0 555 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 SPG21Q9NZD8 308 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 THEGQ9P2T0 379 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 AGAP14A8MT82 685 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 LAG3P18627 525 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 UGT1A1P22309 533 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 UGT1A4P22310 534 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 MYF6P23409 242 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 VARSP26640 1264 aaKnown RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 UGT1A3P35503 534 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 UGT1A5P35504 534 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 ATN1P54259 1190 aaPredicted RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 TUBA4AP68366 448 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 SLC7A9P82251 487 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 PLEKHG6Q3KR16 790 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 RFTN2Q52LD8 501 aaPredicted RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 B3GNT6Q6ZMB0 384 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 FIBCD1Q8N539 461 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 FAM47BQ8NA70 645 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 OR2AP1Q8NGE2 309 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 ZFP28Q8NHY6 868 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 FIBINQ8TAL6 211 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 OSCP1Q8WVF1 389 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 AUTS2Q8WXX7 1259 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 MRPS31Q92665 395 aaKnown RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 RPF2Q9H7B2 306 aaKnown RBP25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 TRPS1Q9UHF7 1281 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 SH3BP1Q9Y3L3 701 aa25.9■■□□□ 1.74
CUEDC1-201ENST00000360238 A0A1B0GTW7 788 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 PDLIM1O00151 329 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 PLOD2O00469 737 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 ACOX3O15254 700 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 BMP1P13497 986 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 GABRR2P28476 465 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 PWP1Q13610 501 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 HABP4Q5JVS0 413 aaKnown RBP25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 CGREF1Q99674 301 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 CAAP1Q9H8G2 361 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 CLK4Q9HAZ1 481 aaKnown RBP25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 RC3H2Q9HBD1 1191 aaKnown RBP25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 SLC8A2Q9UPR5 921 aa25.89■■□□□ 1.74
CUEDC1-201ENST00000360238 RNF103-CHMP3A0A140T963 221 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 K7EPI3 171 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 SLC28A1O00337 649 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 CKMP06732 381 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 CYP4F8P98187 520 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 MERTKQ12866 999 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 KCTD21Q4G0X4 260 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 BBS7Q8IWZ6 715 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 OR8J3Q8NGG0 315 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 NTMT1Q9BV86 223 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 TNKS2Q9H2K2 1166 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 CFAP97Q9P2B7 532 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 ZMYM5Q9UJ78 669 aa25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 EIF3LQ9Y262 564 aaKnown RBP25.89■■□□□ 1.73
CUEDC1-201ENST00000360238 HELZP42694 1942 aaKnown RBP25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CBSLP0DN79 551 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CBSP35520 551 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 OR4D2P58180 307 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 RPL38P63173 70 aaKnown RBP25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 KIAA0040Q15053 153 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 ZSWIM9Q86XI8 627 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 TTC16Q8NEE8 873 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 TNIP2Q8NFZ5 429 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 BIRC7Q96CA5 298 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 DEFB118Q96PH6 123 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 ZBTB18Q99592 522 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 KLHL42Q9P2K6 505 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CLEC4EQ9ULY5 219 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 EBLN1P0CF75 366 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CD70P32970 193 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 NSG1P42857 185 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 SLC36A3Q495N2 470 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 DGKKQ5KSL6 1271 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 GAREM2Q75VX8 874 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 TRIML2Q8N7C3 387 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 NSMCE2Q96MF7 247 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CD320Q9NPF0 282 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 KCTD5Q9NXV2 234 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 ASIC5Q9NY37 505 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 OGDHLQ9ULD0 1010 aa25.88■■□□□ 1.73
CUEDC1-201ENST00000360238 CARNS1A5YM72 827 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 CCDC160A6NGH7 325 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 NPIPB15A6NHN6 443 aaPredicted RBP25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 TEX28O15482 410 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 LDLRP01130 860 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 ALDH3B2P48448 385 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 PIK3CGP48736 1102 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 TRIM46Q7Z4K8 759 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 ZNF296Q8WUU4 475 aaPredicted RBP25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 PPM1MQ96MI6 270 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 USP22Q9UPT9 525 aa25.87■■□□□ 1.73
CUEDC1-201ENST00000360238 TULP3O75386 442 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms