RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TMC8Q8IU68 726 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 LRRC71Q8N4P6 559 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 ZNF680Q8NEM1 530 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 GPR137Q96N19 417 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 FCRL3Q96P31 734 aaPredicted RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 GHITMQ9H3K2 345 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 TNFRSF12AQ9NP84 129 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 PCDHB14Q9Y5E9 798 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 HRH3Q9Y5N1 445 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 TAF1P21675 1872 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 SLC12A8A0AV02 714 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 BCKDKO14874 412 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 CYP11A1P05108 521 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 SERPINF2P08697 491 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 ALDOCP09972 364 aaKnown RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 HTR1EP28566 365 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 RARRES1P49788 294 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 GMPSP49915 693 aaPredicted RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 SCNN1GP51170 649 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 EEFSECP57772 596 aaKnown RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 EML3Q32P44 896 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 RABL3Q5HYI8 236 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 COQ5Q5HYK3 327 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 IER5Q5VY09 327 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 DBX2Q6ZNG2 339 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 ZC3HC1Q86WB0 502 aaKnown RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 C9orf62Q8N4C0 152 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 KCT2Q8NC54 265 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 LPAR1Q92633 364 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 AGAP2Q99490 1192 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 AMNQ9BXJ7 453 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 FBRSL1Q9HCM7 1045 aaKnown RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 ASAH2Q9NR71 780 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 XPR1Q9UBH6 696 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 TJP2Q9UDY2 1190 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 ACTL7AQ9Y615 435 aa15.5■□□□□ 0.07
RTN3-205ENST00000356000 OAS3Q9Y6K5 1087 aaKnown RBP15.5■□□□□ 0.07
RTN3-205ENST00000356000 WDPCPO95876 746 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 PGRP06401 933 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 TNNI1P19237 187 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 MAP2K6P52564 334 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 ASAH1Q13510 395 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 HKDC1Q2TB90 917 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 PPP1R26Q5T8A7 1209 aaPredicted RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 PAMR1Q6UXH9 720 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 SVOPLQ8N434 492 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 CDC26Q8NHZ8 85 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 ASB15Q8WXK1 588 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 INTS7Q9NVH2 962 aaKnown RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 ING3Q9NXR8 418 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 MUTYHQ9UIF7 546 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 FBXO10Q9UK96 956 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 U3KQV3 271 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 HACD1B0YJ81 288 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 PAPSS2O95340 614 aaPredicted RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 CYBBP04839 570 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 RAB3AP20336 220 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 PPP3CCP48454 512 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 GLUD2P49448 558 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 LBX1P52954 281 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 DNAJB13P59910 316 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 BAATQ14032 418 aaPredicted RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 BAK1Q16611 211 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 ALFQ53S48 1182 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 ZC3H12BQ5HYM0 836 aaKnown RBP15.49■□□□□ 0.07
RTN3-205ENST00000356000 NLRP8Q86W28 1048 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 HS3ST5Q8IZT8 346 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 SETD9Q8NE22 299 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 VPS39Q96JC1 886 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 NSMCE2Q96MF7 247 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 SLC6A15Q9H2J7 730 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 SLC39A10Q9ULF5 831 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 STON1Q9Y6Q2 735 aa15.49■□□□□ 0.07
RTN3-205ENST00000356000 HUS1O60921 280 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 RPLP0P05388 317 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 RPL9P32969 192 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 TNFSF8P32971 234 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 SOX11P35716 441 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 LIMK1P53667 647 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 GRK1Q15835 563 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 CYHR1Q6ZMK1 362 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 CDH26Q8IXH8 852 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 PCDH19Q8TAB3 1148 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 DNAJB14Q8TBM8 379 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 RIT1Q92963 219 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 AHCYL2Q96HN2 611 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 HYLS1Q96M11 299 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 FOPNLQ96NB1 174 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 SAMD11Q96NU1 681 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 SIGLEC11Q96RL6 698 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 SEC22CQ9BRL7 303 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 RHNO1Q9BSD3 238 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 COPS3Q9UNS2 423 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 M0R082 166 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 TNFRSF21O75509 655 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 ITGAMP11215 1152 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 CPN2P22792 545 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms