RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 RYBPQ8N488 228 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 OR4D11Q8NGI4 311 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 EEF1AKMT1Q8WVE0 214 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TIMP4Q99727 224 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TCF25Q9BQ70 676 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ACSL6Q9UKU0 697 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 FZD10Q9ULW2 581 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TCAF1Q9Y4C2 921 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 B4DXG7 233 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ZNHIT1O43257 154 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 DKK1O94907 266 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SEC24AO95486 1093 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TGFB1P01137 390 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CNPP09543 421 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 COX4I1P13073 169 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 DAOAP59103 153 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 NTHL1P78549 312 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 KLC1Q07866 573 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 FAM27D1Q5T7N8 215 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SEL1L2Q5TEA6 688 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SLC24A5Q71RS6 500 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 RDM1Q8NG50 284 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TBC1D15Q8TC07 691 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CCHCR1Q8TD31 782 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 FAM122AQ96E09 287 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ATOH8Q96SQ7 321 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 MKRN2Q9H000 416 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 QRSL1Q9H0R6 528 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 TMEM206Q9H813 350 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CERS4Q9HA82 394 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SLAMF7Q9NQ25 335 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 C2orf42Q9NWW7 574 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PPT2Q9UMR5 302 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TGP01266 2768 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PNMA8CA0A1B0GUJ8 204 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CCDC162PA2VCL2 907 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 RGSL1A5PLK6 1076 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ARL5CA6NH57 179 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 RRN3P2A6NIE6 340 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 HTRA2O43464 458 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 CCNT2O60583 730 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 FGF18O76093 207 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 IGLV3-25P01717 112 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CCND1P24385 295 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 OPRL1P41146 370 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 LEPRP48357 1165 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 CLCN5P51795 746 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 MRPS35P82673 323 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 IL1RL1Q01638 556 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 DUSP2Q05923 314 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 HTR4Q13639 388 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SEPT7Q16181 437 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 MUM1Q2TAK8 710 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ZNF484Q5JVG2 852 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 OGFRL1Q5TC84 451 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 STK32CQ86UX6 486 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 STYXQ8WUJ0 223 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CHAC2Q8WUX2 184 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CEP295NLQ96MC4 621 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ADPGKQ9BRR6 497 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CNPY3Q9BT09 278 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SMARCAD1Q9H4L7 1026 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SAMD15Q9P1V8 674 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ABCG2Q9UNQ0 655 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PIN4Q9Y237 131 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 NUP210LQ5VU65 1888 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 GTPBP1O00178 669 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 GFRA2O00451 464 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PIP5K1BO14986 540 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SCO1O75880 301 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 OPN1SWP03999 348 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TYK2P29597 1187 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 THPOP40225 353 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SLC6A3Q01959 620 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CAV1Q03135 178 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 HNRNPDQ14103 355 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 CTF1Q16619 201 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SYT16Q17RD7 645 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 PEAR1Q5VY43 1037 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 FBXL22Q6P050 247 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 GALNT5Q7Z7M9 940 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 DHDDSQ86SQ9 333 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 TMEM35BQ8NCS4 154 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 MCUQ8NE86 351 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 POF1BQ8WVV4 589 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ISG20Q96AZ6 181 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 HMCESQ96FZ2 354 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 ZNF583Q96ND8 569 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 CENPKQ9BS16 269 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SPC25Q9HBM1 224 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 SEMA4BQ9NPR2 832 aaPredicted RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 TM7SF3Q9NS93 570 aa5.53□□□□□ -1.52
CD47-201ENST00000355354 DNAAF2Q9NVR5 837 aaKnown RBP5.53□□□□□ -1.52
CD47-201ENST00000355354 ARHGEF37A1IGU5 675 aa5.52□□□□□ -1.53
CD47-201ENST00000355354 SCN2BO60939 215 aa5.52□□□□□ -1.53
CD47-201ENST00000355354 LRATO95237 230 aa5.52□□□□□ -1.53
CD47-201ENST00000355354 RALBP11234 206 aa5.52□□□□□ -1.53
CD47-201ENST00000355354 CTPS1P17812 591 aa5.52□□□□□ -1.53
CD47-201ENST00000355354 SLC1A1P43005 524 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms