RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 UBASH3BQ8TF42 649 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 GIPC2Q8TF65 315 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RNF145Q96MT1 663 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RPRD1AQ96P16 312 aaPredicted RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 SEMA3CQ99985 751 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 OR2B2Q9GZK3 357 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SLC25A51Q9H1U9 297 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SP140LQ9H930 580 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ZW10O43264 779 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NOBOXO60393 691 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TSPAN3O60637 253 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RBP1P09455 135 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 LINC00032P0C843 101 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RPL9P32969 192 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 ACVRL1P37023 503 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 OR1G1P47890 313 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TM4SF4P48230 202 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RENBPP51606 427 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 YBX1P67809 324 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 FCHO2Q0JRZ9 810 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TUBA3CQ13748 450 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SQLEQ14534 574 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NPTX1Q15818 432 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 AASDHQ4L235 1098 aaPredicted RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 SIRPB2Q5JXA9 342 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 FAM205BPQ63HN1 556 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NECAB2Q7Z6G3 386 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ZNF280BQ86YH2 543 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 IGSF8Q969P0 613 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TUBGCP3Q96CW5 907 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ITCHQ96J02 903 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ACAT2Q9BWD1 397 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 PRKD2Q9BZL6 878 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SMOC2Q9H3U7 446 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 GSTO2Q9H4Y5 243 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SEMA4BQ9NPR2 832 aaPredicted RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 A0A0U1RQS6 177 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ATP6V1G2-DDX39BF2Z307 99 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 IGLV3-25P01717 112 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ALDOCP09972 364 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 AZGP1P25311 298 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 LEPRP48357 1165 aaKnown RBP9.24□□□□□ -0.93
SMG6-202ENST00000354901 CLCN5P51795 746 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SH3BP2P78314 561 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CREB5Q02930 508 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CHRNEQ04844 493 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CD300LGQ6UXG3 332 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 PELI3Q8N2H9 469 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TOR1AIP2Q8NFQ8 470 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 RMDN1Q96DB5 314 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 C19orf60Q96EN9 201 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 TXNDC15Q96J42 360 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 DHRS9Q9BPW9 319 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 SEZ6LQ9BYH1 1024 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 CCSER2Q9H7U1 834 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 NMRK2Q9NPI5 230 aa9.24□□□□□ -0.93
SMG6-202ENST00000354901 A0A1B0GTL3 188 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 PIP5K1BO14986 540 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 GPR182O15218 404 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 CRCPO75575 148 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 TUSC3Q13454 348 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 GRB7Q14451 532 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SUZ12Q15022 739 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 C10orf120Q5SQS8 335 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 MANEALQ5VSG8 457 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 ISCA2Q86U28 154 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 CDH24Q86UP0 819 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 RETREG3Q86VR2 466 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 TBC1D21Q8IYX1 336 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 DNAJB14Q8TBM8 379 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SNAPC3Q92966 411 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SPON2Q9BUD6 331 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SUCOQ9UBS9 1254 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 SNX6Q9UNH7 406 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 PRRC2BQ5JSZ5 2229 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 A0A0J9YYE9 177 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SCAMP3O14828 347 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 FADS2O95864 444 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 S1PR4O95977 384 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 GOT2P00505 430 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 PGRP06401 933 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SLC2A3P11169 496 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 ZNF267Q14586 743 aaPredicted RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 TRIM60Q495X7 471 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 UNC50Q53HI1 259 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 MS4A13Q5J8X5 152 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SAMD4BQ5PRF9 694 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 FBXL22Q6P050 247 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms