RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PKN3Q6P5Z2 889 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF517Q6ZMY9 492 aaPredicted RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 SLC44A2Q8IWA5 706 aaPredicted RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 SPERTQ8NA61 448 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■□□□ 14
PTBP1-201ENST00000349038 PTERQ96BW5 349 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 MBOAT4Q96T53 435 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 ABCB9Q9NP78 766 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 OPTCQ9UBM4 332 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 OGDHLQ9ULD0 1010 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 PRKAB1Q9Y478 270 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 PCDHGA10Q9Y5H3 936 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 TIMM13Q9Y5L4 95 aaPredicted RBP14.94□□□□□ -0.02
PTBP1-201ENST00000349038 MAU2Q9Y6X3 613 aa14.94□□□□□ -0.02
PTBP1-201ENST00000349038 SAGE2PA6NJ88 616 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 H0YAE9 185 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 RGS10O43665 173 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PRSS23O95084 383 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 GABARAPO95166 117 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 VIPP01282 170 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 IGFBP5P24593 272 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF280AP59817 542 aaPredicted RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF267Q14586 743 aaPredicted RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CYP27C1Q4G0S4 372 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PRSS36Q5K4E3 855 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 OR2T12Q8NG77 320 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 GTF2H4Q92759 462 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 MALT1Q9UDY8 824 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PCDHA9Q9Y5H5 950 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 EFNA1P20827 205 aaPredicted RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 NOS2P35228 1153 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 SLC15A1P46059 708 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CDKN2DP55273 166 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 MAP3K7CLP57077 242 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PAFAH1B3Q15102 231 aaKnown RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 LAIR2Q6ISS4 152 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CES5AQ6NT32 575 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PRMT9Q6P2P2 845 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 B3GNT8Q7Z7M8 397 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CYP4Z1Q86W10 505 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 MINDY1Q8N5J2 469 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 OR6F1Q8NGZ6 308 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 COPS5Q92905 334 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 DUS3LQ96G46 650 aaKnown RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 RGS18Q9NS28 235 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 POLR3BQ9NW08 1133 aaPredicted RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CDH9Q9ULB4 789 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 TCRBV5S2A0A599 114 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 AGAP5A6NIR3 686 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 FFAR3O14843 346 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 GPR42O15529 346 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 RAP2AP10114 183 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 JUNBP17275 347 aaPredicted RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PTGS2P35354 604 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 FAM189BP81408 668 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 CDK10Q15131 360 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 RUNDC3AQ59EK9 446 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 VARS2Q5ST30 1063 aaKnown RBP14.93□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF678Q5SXM1 525 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 DCAF15Q66K64 600 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 ZNF544Q6NX49 715 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 GRAMD2AQ8IUY3 354 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 PIK3C3Q8NEB9 887 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 TBL1YQ9BQ87 522 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 NARFLQ9H6Q4 476 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 GALPQ9UBC7 116 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 SARDHQ9UL12 918 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 TPRKBQ9Y3C4 175 aa14.93□□□□□ -0.02
PTBP1-201ENST00000349038 A0A0C4DFX4 3053 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 A0A0G2JMZ2 1700 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 LRRC37A2A6NM11 1700 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 LOC105371267A0A1B0GV96 52 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 A0A1W2PP18 115 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 NUPL2O15504 423 aaKnown RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 BEST1O76090 585 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 WDR47O94967 919 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 AKAP5P24588 427 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 ATN1P54259 1190 aaPredicted RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 ISL1P61371 349 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 BST2Q10589 180 aaKnown RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 SMARCB1Q12824 385 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 NR6A1Q15406 480 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 KYAT1Q16773 422 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 KCTD11Q693B1 232 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 LAIR1Q6GTX8 287 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 BLOC1S3Q6QNY0 202 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 MTFMTQ96DP5 389 aaKnown RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 YTHDF1Q9BYJ9 559 aaKnown RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 UCK2Q9BZX2 261 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 PCDHGB6Q9Y5F9 930 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 MYO10Q9HD67 2058 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 CENPBD1B2RD01 187 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 UBL4AP11441 157 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 SDHBP21912 280 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 CRISP3P54108 245 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 MED22Q15528 200 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 OTUD1Q5VV17 481 aaPredicted RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 PDZD4Q76G19 769 aaPredicted RBP14.92□□□□□ -0.02
PTBP1-201ENST00000349038 TIGD4Q8IY51 512 aa14.92□□□□□ -0.02
PTBP1-201ENST00000349038 CACTIN-AS1Q8N1I8 211 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms