RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 TUBA1AQ71U36 451 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 PIWIL3Q7Z3Z3 882 aaKnown RBP15.63■□□□□ 0.09
HMGA1-202ENST00000347617 SCD5Q86SK9 330 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 TAC4Q86UU9 113 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ZBTB46Q86UZ6 589 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 P2RY8Q86VZ1 359 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 SCN4BQ8IWT1 228 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ADHFE1Q8IWW8 467 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 CHCHD4Q8N4Q1 142 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 OR5K1Q8NHB7 308 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 FAR1Q8WVX9 515 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 EDEM1Q92611 657 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 FATE1Q969F0 183 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 REXO5Q96IC2 774 aaKnown RBP15.63■□□□□ 0.09
HMGA1-202ENST00000347617 MRGPRX2Q96LB1 330 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 DACH2Q96NX9 599 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 C1QTNF3Q9BXJ4 246 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 C11orf49Q9H6J7 331 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 MAGIXQ9H6Y5 334 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ATP13A1Q9HD20 1204 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF229Q9UJW7 825 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 ERVW-1Q9UQF0 538 aa15.63■□□□□ 0.09
HMGA1-202ENST00000347617 SYCE1LA8MT33 242 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 S1PR4O95977 384 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PTTG1O95997 202 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 IL1RNP18510 177 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 HOXC13P31276 330 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ZFP36L2P47974 494 aaKnown RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 OR4D2P58180 307 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ISL1P61371 349 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 IFITM3Q01628 133 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 CLCQ05315 142 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PRKG2Q13237 762 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SELPLGQ14242 412 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 MEP1AQ16819 746 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 IMPG1Q17R60 797 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 DPY19L1Q2PZI1 675 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PAGE2BQ5JRK9 111 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PAGE3Q5JUK9 113 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SYT6Q5T7P8 510 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ATAD3BQ5T9A4 648 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ANKS6Q68DC2 871 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SLC8B1Q6J4K2 584 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 TXNDC11Q6PKC3 985 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 BTLAQ7Z6A9 289 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 DEFB128Q7Z7B8 93 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ZFAND4Q86XD8 727 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 EID3Q8N140 333 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF689Q96CS4 500 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF599Q96NL3 588 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 HOXD1Q9GZZ0 328 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 TKTL2Q9H0I9 626 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SLC25A51Q9H1U9 297 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 TUBB1Q9H4B7 451 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 CWH43Q9H720 699 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SACM1LQ9NTJ5 587 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 LOC100130705A0A1B0GUX0 176 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ILVBLA1L0T0 632 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 H0Y626 953 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 DFFAO00273 331 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 STX16O14662 325 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 AURKAO14965 403 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 KIAA0355O15063 1070 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 UPK1BO75841 260 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 FKBP9O95302 570 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 TRIM16O95361 564 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SEC24AO95486 1093 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 MLYCDO95822 493 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 TIMP1P01033 207 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 HAPLN1P10915 354 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SLC2A3P11169 496 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 CCR1P32246 355 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 EIF2DP41214 584 aaKnown RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ST13P50502 369 aaKnown RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PLA2G4EQ3MJ16 856 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 FUT11Q495W5 492 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.62■□□□□ 0.097e-31■■■■■ 70.4
HMGA1-202ENST00000347617 NECAB2Q7Z6G3 386 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 HIPK1Q86Z02 1210 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 GPR150Q8NGU9 434 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 GLMNQ92990 594 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 PTERQ96BW5 349 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 C1orf74Q96LT6 269 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SERPINB11Q96P15 392 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 ZNF300Q96RE9 604 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 MMP27Q9H306 513 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SYTL2Q9HCH5 934 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 OLA1Q9NTK5 396 aaKnown RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 POLR3BQ9NW08 1133 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SMPD4Q9NXE4 827 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 SCN3BQ9NY72 215 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 NPAP1Q9NZP6 1156 aa15.62■□□□□ 0.09
HMGA1-202ENST00000347617 GBF1Q92538 1859 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 MTMR11A4FU01 709 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 TTC34A8MYJ7 566 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 I6L893 689 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-202ENST00000347617 DYRK3O43781 588 aa15.61■□□□□ 0.09
HMGA1-202ENST00000347617 MAFKO60675 156 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms