RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MGAT4DA6NG13 374 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 NCF1BA6NI72 391 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 NCF1CA8MVU1 366 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 SLCO1B7G3V0H7 640 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 LIN7AO14910 233 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 LATO43561 262 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 PSIP1O75475 530 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 C8GP07360 202 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ENO2P09104 434 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 NCF1P14598 390 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 EEF1DP29692 281 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 PDHA2P29803 388 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 IGFALSP35858 605 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 GGT5P36269 586 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 RPIAP49247 311 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 IDH3AP50213 366 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 CDH13P55290 713 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SH3BP2P78314 561 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ARHGAP8P85298 464 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 PLOD1Q02809 727 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 CLCQ05315 142 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 TUBB3Q13509 450 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 UGT3A2Q3SY77 523 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SULT1C3Q6IMI6 304 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 EPGNQ6UW88 154 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 FAM124AQ86V42 546 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SLC22A15Q8IZD6 547 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 FLCNQ8NFG4 579 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 OR2L2Q8NH16 312 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 MAPK15Q8TD08 544 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ZNF483Q8TF39 744 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 HMGB4Q8WW32 186 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 STON2Q8WXE9 905 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 GLMNQ92990 594 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 CLDN23Q96B33 292 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 BMFQ96LC9 184 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 EBF4Q9BQW3 602 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 APOOQ9BUR5 198 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 C1QTNF7Q9BXJ2 289 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 COG4Q9H9E3 785 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 PARVBQ9HBI1 364 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 EML4Q9HC35 981 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 ABCF3Q9NUQ8 709 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 DNAJC28Q9NX36 388 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 UTP6Q9NYH9 597 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 HEY2Q9UBP5 337 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 VTI1BQ9UEU0 232 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SLC23A2Q9UGH3 650 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 PCTPQ9UKL6 214 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 TNPO3Q9Y5L0 923 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 LRRC72A6NJI9 287 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 GPR89AB7ZAQ6 455 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 E2F3O00716 465 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 HDAC3O15379 428 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SLC31A1O15431 190 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SNX2O60749 519 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 GPR89BP0CG08 455 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 VCLP18206 1134 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 MAT2AP31153 395 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 ABRQ12979 859 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SP140Q13342 867 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 GTF2H3Q13889 308 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 BOP1Q14137 746 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 UBXN2BQ14CS0 331 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ZXDCQ2QGD7 858 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 LACTB2Q53H82 288 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 FBXO48Q5FWF7 155 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 TMEM31Q5JXX7 168 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 METTL2BQ6P1Q9 378 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 TTC23LQ6PF05 361 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 UBE2R2Q712K3 238 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 CUZD1Q86UP6 607 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 UBALD2Q8IYN6 164 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 CFAP206Q8IYR0 622 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 CLYBLQ8N0X4 340 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 DENND6BQ8NEG7 585 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 FOXJ1Q92949 421 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ESAMQ96AP7 390 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 TMEM159Q96B96 161 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 SHCBP1LQ9BZQ2 653 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 FOXQ1Q9C009 403 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 MYLK2Q9H1R3 596 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 CHRDQ9H2X0 955 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 WDR26Q9H7D7 661 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 EBF2Q9HAK2 575 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 PHPT1Q9NRX4 125 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 WSB2Q9NYS7 404 aaPredicted RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 TSR3Q9UJK0 312 aaKnown RBP10.75□□□□□ -0.69
ECM1-201ENST00000346569 ZNF225Q9UK10 706 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 FBXL21Q9UKT6 434 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 TRAF6Q9Y4K3 522 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 ASB1Q9Y576 335 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 OR1A2Q9Y585 309 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 HS3ST3A1Q9Y663 406 aa10.75□□□□□ -0.69
ECM1-201ENST00000346569 POM121BA6NF01 834 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 DCTN3O75935 186 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 GUCA1CO95843 209 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 CEACAM5P06731 702 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms