RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 LRRN4CLQ8ND94 238 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 OR5T1Q8NG75 326 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 AP2M1Q96CW1 435 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TMEM68Q96MH6 324 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 NPAS2Q99743 824 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 FEM1AQ9BSK4 669 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ADAMTS10Q9H324 1103 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 OPA3Q9H6K4 179 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TFCP2L1Q9NZI6 479 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF223Q9UK11 482 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 TFR2Q9UP52 801 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ERBB3P21860 1342 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PPP1R3GB7ZBB8 358 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 SLC19A2O60779 497 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 NR2F1P10589 423 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 RENBPP51606 427 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 SIK1P57059 783 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 GPAT3Q53EU6 434 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ARL6Q9H0F7 186 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PCDHA6Q9UN73 950 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 RPL36Q9Y3U8 105 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 U3KQV3 271 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 NUP210Q8TEM1 1887 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 CPS1P31327 1500 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 H3BNH8 94 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 RFXANKO14593 260 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ACSL4O60488 711 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PRAMEF2O60811 474 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 MITFO75030 526 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 DFFBO76075 338 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PGLSO95336 258 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 LTA4HP09960 611 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 UQCRC1P31930 480 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 NOS2P35228 1153 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 KHDC1Q4VXA5 237 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 XKR4Q5GH76 650 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 CPTPQ5TA50 214 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PGM2L1Q6PCE3 622 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 KCNIP4Q6PIL6 250 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TMED4Q7Z7H5 227 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 SPARTQ8N0X7 666 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF565Q8N9K5 539 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ANKRD53Q8N9V6 530 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PANX3Q96QZ0 392 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 AGAP2Q99490 1192 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 MTMR12Q9C0I1 747 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 C12orf65Q9H3J6 166 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 MOB1AQ9H8S9 216 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TCF7L1Q9HCS4 588 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 MTMR4Q9NYA4 1195 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 HCN2Q9UL51 889 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF701M0R085 212 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 FOXO3O43524 673 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TACSTD2P09758 323 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TMEM31Q5JXX7 168 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF773Q6PK81 442 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 RANBP3LQ86VV4 465 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 TMC8Q8IU68 726 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PHTF2Q8N3S3 785 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PIGXQ8TBF5 258 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ASB9Q96DX5 294 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZFP14Q9HCL3 533 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 USP17L3A6NCW0 530 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 USP17L4A6NCW7 530 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF705FA8MVS1 300 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 TO15178 435 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF254O75437 659 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 GJB6O95452 261 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF705DP0CH99 300 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF705BP0CI00 300 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 CHRNB1P11230 501 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ODC1P11926 461 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TTPAP49638 278 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 EIF2B1Q14232 305 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 PCK2Q16822 640 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PTPN20Q4JDL3 420 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 RNASEH2BQ5TBB1 312 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 USP45Q70EL2 814 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 USP17L1Q7RTZ2 530 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF720Q7Z2F6 126 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TNS4Q8IZW8 715 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ADIPOR1Q96A54 375 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF512Q96ME7 567 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 EBNA1BP2Q99848 306 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 SMURF1Q9HCE7 757 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 XPNPEP1Q9NQW7 623 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 SCN11AQ9UI33 1791 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 GREB1Q4ZG55 1949 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 C13orf42A0A1B0GVH6 325 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 PHKG2P15735 406 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 SSTR1P30872 391 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 GNALP38405 381 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 PRKCIP41743 596 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 RAB10P61026 200 aa6.09□□□□□ -1.44
VCAN-203ENST00000343200 BRINP3Q76B58 766 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms