RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RLN3Q8WXF3 142 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 GLMNQ92990 594 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 LINC00615Q96LM1 132 aaPredicted RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 RMDN2Q96LZ7 410 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 NSUN5Q96P11 429 aaKnown RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 C6orf106Q9H6K1 298 aaPredicted RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 MOSPD1Q9UJG1 213 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 CA5BQ9Y2D0 317 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 POM121BA6NF01 834 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 H3BM21 787 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 CACNB4O00305 520 aaPredicted RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 FPGTO14772 594 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 LIN7AO14910 233 aaPredicted RBP14.39□□□□□ -0.11
CBX3-201ENST00000337620 CHUKO15111 745 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 GRID2O43424 1007 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 ARHGAP8P85298 464 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 NFE2L1Q14494 772 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 SETDB1Q15047 1291 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 SH2D4BQ5SQS7 431 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 C11orf96Q7Z7L8 435 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 PJA1Q8NG27 643 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 OR2L2Q8NH16 312 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 PLCD4Q9BRC7 762 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 SLC12A9Q9BXP2 914 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 TRIM54Q9BYV2 358 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 RDH14Q9HBH5 336 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 PARVBQ9HBI1 364 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 TM7SF3Q9NS93 570 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 PDE10AQ9Y233 779 aa14.39□□□□□ -0.11
CBX3-201ENST00000337620 C17orf113A0A1B0GUU1 675 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 MGAT4DA6NG13 374 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 FSBPO95073 299 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 IGLV3-19P01714 112 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 HIST1H2AGP0C0S8 130 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 HIST1H2ADP20671 130 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 HNRNPA2B1P22626 353 aaKnown RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 MBOAT1Q6ZNC8 495 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 CUZD1Q86UP6 607 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 AMZ2Q86W34 360 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SLC22A15Q8IZD6 547 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 GJD3Q8N144 294 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 FRMD1Q8N878 549 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 PDPRQ8NCN5 879 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 TRPC4APQ8TEL6 797 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 HIST1H2AHQ96KK5 128 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 HIST1H2AJQ99878 128 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 H2AFJQ9BTM1 129 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 TRMOQ9BU70 441 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 GPR174Q9BXC1 333 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 ARL15Q9NXU5 204 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 WSB2Q9NYS7 404 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 EIF2B4Q9UI10 523 aaKnown RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 H0Y8X5 98 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 GFYI3L273 518 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 PPP6CO00743 305 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 UBFD1O14562 309 aaKnown RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 ZNF217O75362 1048 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SNUPNO95149 360 aaKnown RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 MATN4O95460 622 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 GSTM1P09488 218 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 CYP2A7P20853 494 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 CD6P30203 668 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 OXTRP30559 389 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 GSTM4Q03013 218 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 CLCQ05315 142 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SPEM1Q8N4L4 309 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 FAM160A2Q8N612 972 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 HM13Q8TCT9 377 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 MCOLN3Q8TDD5 553 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 FOPNLQ96NB1 174 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 CHRDQ9H2X0 955 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SEMA4BQ9NPR2 832 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 WWOXQ9NZC7 414 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SLC23A2Q9UGH3 650 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.38□□□□□ -0.11
CBX3-201ENST00000337620 FIS1Q9Y3D6 152 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 SIT1Q9Y3P8 196 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 ASB1Q9Y576 335 aa14.38□□□□□ -0.11
CBX3-201ENST00000337620 TMEM233B4DJY2 109 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 GPR89AB7ZAQ6 455 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 KMOO15229 486 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 SLC16A5O15375 505 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 TAPBPO15533 448 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 FUCA1P04066 466 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 CEACAM5P06731 702 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 RPS17P08708 135 aaKnown RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 ANXA5P08758 320 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 ENO2P09104 434 aaPredicted RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 GPR89BP0CG08 455 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 MAP4P27816 1152 aaKnown RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 HSPA7P48741 367 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 GALNT1Q10472 559 aaPredicted RBP14.37□□□□□ -0.11
CBX3-201ENST00000337620 SP140Q13342 867 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 VWA5B1Q5TIE3 1220 aa14.37□□□□□ -0.11
CBX3-201ENST00000337620 SULT1C3Q6IMI6 304 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms