RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 AGAP9Q5VTM2 703 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
CHGA-202ENST00000334654 UGT3A1Q6NUS8 523 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 SPDYE1Q8NFV5 336 aaPredicted RBP17.13■□□□□ 0.33
CHGA-202ENST00000334654 EEF1AKMT1Q8WVE0 214 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 ANKRD49Q8WVL7 239 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 GLMNQ92990 594 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 ZBTB9Q96C00 473 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 DPEP2Q9H4A9 486 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 OSGEPL1Q9H4B0 414 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 SNX15Q9NRS6 342 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 TRMT6Q9UJA5 497 aaKnown RBP17.13■□□□□ 0.33
CHGA-202ENST00000334654 ACSL5Q9ULC5 683 aa17.13■□□□□ 0.33
CHGA-202ENST00000334654 A0A1W2PPM1 405 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 MAP2K7O14733 419 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 TPP1O14773 563 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 ZNF37AP17032 561 aaPredicted RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 ACADLP28330 430 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 PLOD1Q02809 727 aaPredicted RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 PDAP1Q13442 181 aaKnown RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 CLCA4Q14CN2 919 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 DEFB133Q30KQ1 61 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 LGSNQ5TDP6 509 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 OGFOD3Q6PK18 319 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 LVRNQ6Q4G3 990 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 SH2D5Q6ZV89 423 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 GKN2Q86XP6 184 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 NAGSQ8N159 534 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 TMEM159Q96B96 161 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 RMDN2Q96LZ7 410 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 WWP1Q9H0M0 922 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 IQANK1A0A1B0GTG1 560 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 SNX2O60749 519 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 SASH3O75995 380 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 C2P06681 752 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 ATP5DP30049 168 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 SERPINB8P50452 374 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 TMED2Q15363 201 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 SEPT7Q16181 437 aaKnown RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 UAP1L1Q3KQV9 507 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 TNFAIP8L3Q5GJ75 292 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 CEP85LQ5SZL2 805 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 IYDQ6PHW0 289 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 HDXQ7Z353 690 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 RASGRP3Q8IV61 690 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 FAM46DQ8NEK8 389 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 PATE1Q8WXA2 126 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 TSPAN17Q96FV3 270 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 INSM2Q96T92 566 aaPredicted RBP17.12■□□□□ 0.33
CHGA-202ENST00000334654 EDEM2Q9BV94 578 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 GPAMQ9HCL2 828 aa17.12■□□□□ 0.33
CHGA-202ENST00000334654 EIF3FO00303 357 aaPredicted RBP17.11■□□□□ 0.33
CHGA-202ENST00000334654 TRIM38O00635 465 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 GDF9O60383 454 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 NOBOXO60393 691 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 ANXA6P08133 673 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 CBSLP0DN79 551 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 F3P13726 295 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 CRABP2P29373 138 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 TYK2P29597 1187 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 CBSP35520 551 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
CHGA-202ENST00000334654 SLC12A2P55011 1212 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 DLG1Q12959 904 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 SYTL3Q4VX76 610 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 PDZD3Q86UT5 571 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 C17orf82Q86X59 251 aaPredicted RBP17.11■□□□□ 0.33
CHGA-202ENST00000334654 PDLIM5Q96HC4 596 aaKnown RBP17.11■□□□□ 0.33
CHGA-202ENST00000334654 VIPAS39Q9H9C1 493 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 ZNF624Q9P2J8 865 aaPredicted RBP17.11■□□□□ 0.33
CHGA-202ENST00000334654 IKZF3Q9UKT9 509 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
CHGA-202ENST00000334654 PTPRZ1P23471 2315 aaPredicted RBP17.1■□□□□ 0.33
CHGA-202ENST00000334654 NEMP2A6NFY4 417 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 FFAR2O15552 330 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 MATN4O95460 622 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 IL2P60568 153 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 IRF9Q00978 393 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 TTLL9Q3SXZ7 439 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 NEK10Q6ZWH5 1172 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 PIWIL4Q7Z3Z4 852 aaKnown RBP17.1■□□□□ 0.33
CHGA-202ENST00000334654 CENPLQ8N0S6 344 aaPredicted RBP17.1■□□□□ 0.33
CHGA-202ENST00000334654 SFRP1Q8N474 314 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 OR4C6Q8NH72 309 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 ZDHHC1Q8WTX9 485 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 SYTL2Q9HCH5 934 aa17.1■□□□□ 0.33
CHGA-202ENST00000334654 NLGN3Q9NZ94 848 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms