RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 KLK6Q92876 244 aa11.64□□□□□ -0.55
HDAC6-201ENST00000334136 CEP44Q9C0F1 390 aa11.64□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
HDAC6-201ENST00000334136 U3KQV3 271 aa11.64□□□□□ -0.55
HDAC6-201ENST00000334136 TTC34A8MYJ7 566 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 CACNB4O00305 520 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 LBPP18428 481 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 JAK1P23458 1154 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 IL4RP24394 825 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 SLC6A11P48066 632 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 SQLEQ14534 574 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 PHPT1Q9NRX4 125 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 EIF3LQ9Y262 564 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 GLYATL1P3A0A0U1RQE8 302 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 KLHL33A6NCF5 533 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 NEMP2A6NFY4 417 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 LINC00032P0C843 101 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ELAVL3Q14576 367 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 PGS1Q32NB8 556 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 TIGD2Q4W5G0 525 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 DCBLD1Q8N8Z6 715 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ACTRT2Q8TDY3 377 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 UTP15Q8TED0 518 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 BORCS5Q969J3 196 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF707Q96C28 371 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 MAGED4Q96JG8 741 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 EIF2B3Q9NR50 452 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 DNAJC28Q9NX36 388 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 IFRD1O00458 451 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 DNAJA2O60884 412 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 LTA4HP09960 611 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 HOXD9P28356 352 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 PTPRNQ16849 979 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 INSCQ1MX18 579 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 VPS26BQ4G0F5 336 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ZC3H12BQ5HYM0 836 aaKnown RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 BROXQ5VW32 411 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ZDHHC20Q5W0Z9 365 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 SYCE2Q6PIF2 218 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 RALGPS2Q86X27 583 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-201ENST00000334136 PDSS2Q86YH6 399 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 TMC8Q8IU68 726 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 HPS1Q92902 700 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 ELSPBP1Q96BH3 223 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 MOCOSQ96EN8 888 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 LMAN1LQ9HAT1 526 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 FETUBQ9UGM5 382 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 TEX264Q9Y6I9 313 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 STON1Q9Y6Q2 735 aa11.63□□□□□ -0.55
HDAC6-201ENST00000334136 WASH4PA8MWX3 477 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 BTN3A1O00481 513 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 CD3EAPO15446 510 aaKnown RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ASNA1O43681 348 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 MYO1DO94832 1006 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 KELP23276 732 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 HLA-FP30511 346 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 GMPRP36959 345 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 SPAM1P38567 509 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 TCEA2Q15560 299 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 IL23RQ5VWK5 629 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 PRMT9Q6P2P2 845 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 GALNT18Q6P9A2 607 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 DET1Q7L5Y6 550 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 PHACTR4Q8IZ21 702 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 BTBD1Q9H0C5 482 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 USP29Q9HBJ7 922 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 CD84Q9UIB8 345 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 TCAF1Q9Y4C2 921 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 TRAF6Q9Y4K3 522 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 PDLIM1O00151 329 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 CCL22O00626 93 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 FAM20BO75063 409 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 LEFTY1O75610 366 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ALPIP09923 528 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 IRF9Q00978 393 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 MSLNQ13421 630 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF77Q15935 545 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 SLC44A2Q8IWA5 706 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 EID3Q8N140 333 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ELMO1Q92556 727 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 KCNK12Q9HB15 430 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ZNHIT2Q9UHR6 403 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 UPK3BL1B0FP48 263 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 UPK3BL2E5RIL1 263 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 H6PDO95479 791 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 CACHD1Q5VU97 1274 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 LDB1Q86U70 411 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 CUZD1Q86UP6 607 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 POC5Q8NA72 575 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 PKP2Q99959 881 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 MRPL57Q9BQC6 102 aaKnown RBP11.62□□□□□ -0.55
HDAC6-201ENST00000334136 ABCG8Q9H221 673 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms