RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SPO11Q9Y5K1 396 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 OR1I1O60431 355 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 TSPAN12O95859 305 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 CNPP09543 421 aaKnown RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 VBP1P61758 197 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 EFEMP1Q12805 493 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 MAPK11Q15759 364 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 ZNF691Q5VV52 312 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 PIK3C3Q8NEB9 887 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 RORBQ92753 470 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 KLHL25Q9H0H3 589 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 TMEM45AQ9NWC5 275 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 INVSQ9Y283 1065 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 NAALAD2Q9Y3Q0 740 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 LSM1O15116 133 aaKnown RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 VPS26AO75436 327 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 DNAJB5O75953 348 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 SERPINF2P08697 491 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 CTSHP09668 335 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 BMP4P12644 408 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 DCTP40126 519 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 PTGR1Q14914 329 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 MAPRE1Q15691 268 aaKnown RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 C18orf21Q32NC0 220 aaPredicted RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 TMEM236Q5W0B7 351 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 ADCK1Q86TW2 530 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 MCOLN3Q8TDD5 553 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 SLC13A3Q8WWT9 602 aa23.24■■□□□ 1.31
TSKU-201ENST00000333090 RPRD1AQ96P16 312 aaPredicted RBP23.24■■□□□ 1.31
TSKU-201ENST00000333090 DOCK4Q8N1I0 1966 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ANKRD28O15084 1053 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 SLC22A1O15245 554 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 CHRNA1P02708 482 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ALOX5P09917 674 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 TGM1P22735 817 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 CYP4F3Q08477 520 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 SERINC3Q13530 473 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 DGCR6Q14129 220 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 DSG4Q86SJ6 1040 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 MIB1Q86YT6 1006 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 RMDN1Q96DB5 314 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 SMIM14Q96QK8 99 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 PSD2Q9BQI7 771 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 POLE4Q9NR33 117 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 AASSQ9UDR5 926 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ACTL7AQ9Y615 435 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ZBBXA8MT70 800 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 F8W810 466 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ANGPTL1O95841 491 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 TBX18O95935 607 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 FTH1P02794 183 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ITGB1P05556 798 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 HMBSP08397 361 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 OR1E1P30953 314 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 MAP2K4P45985 399 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 IL2P60568 153 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 CDK5R2Q13319 367 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 INAVAQ3KP66 663 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 CCDC81Q6ZN84 652 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 ADHFE1Q8IWW8 467 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 THEM5Q8N1Q8 247 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 MFSD4AQ8N468 514 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 SCAIQ8N9R8 606 aa23.23■■□□□ 1.31
TSKU-201ENST00000333090 NLE1Q9NVX2 485 aaPredicted RBP23.23■■□□□ 1.31
TSKU-201ENST00000333090 ABI2Q9NYB9 513 aaPredicted RBP23.23■■□□□ 1.31
TSKU-201ENST00000333090 KIAA1522Q9P206 1035 aaPredicted RBP23.23■■□□□ 1.31
TSKU-201ENST00000333090 ELOVL7A1L3X0 281 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 CXCR6O00574 342 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 BCKDKO14874 412 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 EPOP01588 193 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 CYP11A1P05108 521 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 ZNF140P52738 457 aaPredicted RBP23.22■■□□□ 1.31
TSKU-201ENST00000333090 RAPSNQ13702 412 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 DGUOKQ16854 277 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 AFTPHQ6ULP2 937 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 GLT6D1Q7Z4J2 308 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 GTF3C2Q8WUA4 911 aaPredicted RBP23.22■■□□□ 1.31
TSKU-201ENST00000333090 NSMCE3Q96MG7 304 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 ALOXE3Q9BYJ1 711 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 ERVK-18Q9QC07 812 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 RBMX2Q9Y388 322 aaKnown RBP23.22■■□□□ 1.31
TSKU-201ENST00000333090 HAS3O00219 553 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 MGEA5O60502 916 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 FMO3P31513 532 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 RPL38P63173 70 aaKnown RBP23.22■■□□□ 1.31
TSKU-201ENST00000333090 ABRAXAS2Q15018 415 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 FAM174BQ3ZCQ3 159 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 GALNT5Q7Z7M9 940 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 PIANPQ8IYJ0 282 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 ARL10Q8N8L6 244 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 MINDY2Q8NBR6 621 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 OR10Q1Q8NGQ4 319 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 FBXO10Q9UK96 956 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 INTS6Q9UL03 887 aaKnown RBP23.22■■□□□ 1.31
TSKU-201ENST00000333090 TMED5Q9Y3A6 229 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 ORC6Q9Y5N6 252 aa23.22■■□□□ 1.31
TSKU-201ENST00000333090 NDST3O95803 873 aa23.21■■□□□ 1.31
TSKU-201ENST00000333090 CCDC159P0C7I6 412 aa23.21■■□□□ 1.31
TSKU-201ENST00000333090 PKMP14618 531 aaKnown RBP23.21■■□□□ 1.31
TSKU-201ENST00000333090 SLC2A4P14672 509 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms