RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 FICDQ9BVA6 458 aa17.89■□□□□ 0.45
PKP3-201ENST00000331563 SLA2Q9H6Q3 261 aa17.89■□□□□ 0.45
PKP3-201ENST00000331563 SYTL2Q9HCH5 934 aa17.89■□□□□ 0.45
PKP3-201ENST00000331563 MAGEL2Q9UJ55 1249 aa17.89■□□□□ 0.45
PKP3-201ENST00000331563 LEF1Q9UJU2 399 aaPredicted RBP17.89■□□□□ 0.45
PKP3-201ENST00000331563 C3orf18Q9UK00 162 aa17.89■□□□□ 0.45
PKP3-201ENST00000331563 HPRP00739 348 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 OR3A3P47888 321 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 MTPNP58546 118 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 ISL1P61371 349 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 CLCA4Q14CN2 919 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 DCAF4L1Q3SXM0 396 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 FAM109AQ8N4B1 249 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 DTWD1Q8N5C7 304 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 PTGR2Q8N8N7 351 aaPredicted RBP17.88■□□□□ 0.45
PKP3-201ENST00000331563 GALNT6Q8NCL4 622 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 C2CD4AQ8NCU7 369 aaPredicted RBP17.88■□□□□ 0.45
PKP3-201ENST00000331563 PSD4Q8NDX1 1056 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 FRS2Q8WU20 508 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 TEKT5Q96M29 485 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 RDH12Q96NR8 316 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 ZNF300Q96RE9 604 aaPredicted RBP17.88■□□□□ 0.45
PKP3-201ENST00000331563 RBM4BQ9BQ04 359 aaKnown RBP17.88■□□□□ 0.45
PKP3-201ENST00000331563 TBL1YQ9BQ87 522 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 RBM4Q9BWF3 364 aaKnown RBP17.88■□□□□ 0.45
PKP3-201ENST00000331563 LRRC3Q9BY71 257 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 DCSTAMPQ9H295 470 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 U3KQV3 271 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 TRPM7Q96QT4 1865 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 HAS3O00219 553 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 GSTA4O15217 222 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 ANXA6P08133 673 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 FLT3LGP49771 235 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 UFM1P61960 85 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 GPLD1P80108 840 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 ADIGQ0VDE8 80 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 ZNF404Q494X3 552 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 UBXN11Q5T124 520 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 AGAP6Q5VW22 663 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 C9orf57Q5W0N0 161 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 AGAP4Q96P64 663 aa17.88■□□□□ 0.45
PKP3-201ENST00000331563 TYW5A2RUC4 315 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 NCAM2O15394 837 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 CNTN5O94779 1100 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 SLC4A1P02730 911 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 DBTP11182 482 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 CD36P16671 472 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 HERVK_113P63132 956 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 CDK5R2Q13319 367 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 ZBTB6Q15916 424 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 COQ5Q5HYK3 327 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 RAB44Q7Z6P3 723 aaPredicted RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 DTX3Q8N9I9 347 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 OR5H6Q8NGV6 325 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 YIPF6Q96EC8 236 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 HSFY1Q96LI6 401 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 ERVK-6Q9BXR3 956 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 KAT8Q9H7Z6 458 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 LIMD1Q9UGP4 676 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 INVSQ9Y283 1065 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 IPPQ9Y573 584 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 NUP205Q92621 2012 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 ASPDHA6ND91 283 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 FAM25AB3EWG3 89 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 FAM25CB3EWG5 89 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 FAM25GB3EWG6 89 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 PRMT5O14744 637 aaPredicted RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 BCKDKO14874 412 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 SLC22A3O75751 556 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 SLC10A3P09131 477 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 ELNP15502 786 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 OR2B6P58173 313 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 DEFA1P59665 94 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 DEFA3P59666 94 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 PFKFB4Q16877 469 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 GDF6Q6KF10 455 aaPredicted RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 SCIMPQ6UWF3 145 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 GALNT5Q7Z7M9 940 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 METTL4Q8N3J2 472 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 OMA1Q96E52 524 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 NSUN5Q96P11 429 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 PSKH2Q96QS6 385 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 BTBD2Q9BX70 525 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 MRM3Q9HC36 420 aaKnown RBP17.87■□□□□ 0.45
PKP3-201ENST00000331563 PIGVQ9NUD9 493 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 SCN3BQ9NY72 215 aa17.87■□□□□ 0.45
PKP3-201ENST00000331563 AGAP5A6NIR3 686 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 ENPP3O14638 875 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 PMPCBO75439 489 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 ARHGEF15O94989 841 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 NDST3O95803 873 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 CCDC159P0C7I6 412 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 FAM205BPQ63HN1 556 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 FAM86B1Q8N7N1 296 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 ZBTB20Q9HC78 741 aaPredicted RBP17.86■□□□□ 0.45
PKP3-201ENST00000331563 TPRKBQ9Y3C4 175 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 PCDHGA10Q9Y5H3 936 aa17.86■□□□□ 0.45
PKP3-201ENST00000331563 FAM92AA1XBS5 289 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms