RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 G3V2L1 256 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 CHUKO15111 745 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 KMOO15229 486 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 SLC31A1O15431 190 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 MAP3K13O43283 966 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 ZBTB14O43829 449 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 TSPAN12O95859 305 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 S100BP04271 92 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 C8GP07360 202 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 MAT2AP31153 395 aaKnown RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 KIAA1024LP59773 190 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 PPP2CBP62714 309 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 PPP2CAP67775 309 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 NFKB2Q00653 900 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 PPARDQ03181 441 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 RPA4Q13156 261 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 SP140Q13342 867 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 GBX1Q14549 363 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 CHI3L2Q15782 390 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 CDKL4Q5MAI5 379 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 FRA10AC1Q70Z53 315 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 LPCAT2Q7L5N7 544 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 HOMEZQ8IX15 550 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 SPATA6LQ8N4H0 392 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 TMEM151AQ8N4L1 468 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 HM13Q8TCT9 377 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 FOPNLQ96NB1 174 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 ZNF317Q96PQ6 595 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 SLC30A3Q99726 388 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 THAP1Q9NVV9 213 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 NCKIPSDQ9NZQ3 722 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 GALPQ9UBC7 116 aa17.69■□□□□ 0.42
SYNE4-201ENST00000324444 MBD1Q9UIS9 605 aaPredicted RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 CNOT1A5YKK6 2376 aaKnown RBP17.69■□□□□ 0.42
SYNE4-201ENST00000324444 TK2O00142 265 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 RAD51BO15315 384 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 SGTAO43765 313 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 SNX2O60749 519 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 GPC4O75487 556 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 IPO13O94829 963 aaKnown RBP17.68■□□□□ 0.42
SYNE4-201ENST00000324444 SLCO2B1O94956 709 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 FAM107AO95990 144 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 BGNP21810 368 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 IGFALSP35858 605 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 HSPA14Q0VDF9 509 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 BOP1Q14137 746 aaKnown RBP17.68■□□□□ 0.42
SYNE4-201ENST00000324444 TERF2Q15554 542 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 KHDC1Q4VXA5 237 aaKnown RBP17.68■□□□□ 0.42
SYNE4-201ENST00000324444 PIWIL4Q7Z3Z4 852 aaKnown RBP17.68■□□□□ 0.42
SYNE4-201ENST00000324444 GPSM1Q86YR5 675 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 C10orf107Q8IVU9 208 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 OR2L2Q8NH16 312 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 PPP4R1Q8TF05 950 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 KLK6Q92876 244 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 FOXJ1Q92949 421 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 RDH14Q9HBH5 336 aa17.68■□□□□ 0.42
SYNE4-201ENST00000324444 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 MGAT4DA6NG13 374 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 GRID2O43424 1007 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 HIST1H2AGP0C0S8 130 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-201ENST00000324444 ZNF8P17098 575 aaPredicted RBP17.67■□□□□ 0.42
SYNE4-201ENST00000324444 HIST1H2ADP20671 130 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 KCNA4P22459 653 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 RABIFP47224 123 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 PGGT1BP53609 377 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 CTSCP53634 463 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 PTK2BQ14289 1009 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 ACSBG2Q5FVE4 666 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 CFAP157Q5JU67 520 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 METTL2BQ6P1Q9 378 aaKnown RBP17.67■□□□□ 0.42
SYNE4-201ENST00000324444 ARMCX6Q7L4S7 300 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 AMZ2Q86W34 360 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 TMEFF1Q8IYR6 380 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 PELI3Q8N2H9 469 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 LKAAEAR1Q8TD35 194 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 FUBP1Q96AE4 644 aaKnown RBP17.67■□□□□ 0.42
SYNE4-201ENST00000324444 HIST1H2AHQ96KK5 128 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 C7orf26Q96N11 449 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 ATOH8Q96SQ7 321 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 HIST1H2AJQ99878 128 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 H2AFJQ9BTM1 129 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 TRMOQ9BU70 441 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 DPEP2Q9H4A9 486 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 NUDT4Q9NZJ9 180 aa17.67■□□□□ 0.42
SYNE4-201ENST00000324444 TNPO3Q9Y5L0 923 aaKnown RBP17.67■□□□□ 0.42
SYNE4-201ENST00000324444 STX16-NPEPL1H3BU86 382 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 STX16O14662 325 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 TNFRSF10CO14798 259 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 DLX3O60479 287 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 NPHS1O60500 1241 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 POP7O75817 140 aaKnown RBP17.66■□□□□ 0.42
SYNE4-201ENST00000324444 FSBPO95073 299 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 GFAPP14136 432 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 CYP2A7P20853 494 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 DPP6P42658 865 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 LIMK1P53667 647 aa17.66■□□□□ 0.42
SYNE4-201ENST00000324444 TSNQ15631 228 aaKnown RBP17.66■□□□□ 0.42
SYNE4-201ENST00000324444 STPG1Q5TH74 334 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms