RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 VENTXO95231 258 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 APOC2P02655 101 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 PSMA2P25787 234 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 IVDP26440 423 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 ILF3Q12906 894 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CASP8Q14790 479 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 AGERQ15109 404 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 RASA2Q15283 850 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 AGAP7PQ5VUJ5 663 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 LIPNQ5VXI9 398 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TRNP1Q6NT89 227 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 DNAAF5Q86Y56 855 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TAB3Q8N5C8 712 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 AVL9Q8NBF6 648 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 OR2A12Q8NGT7 310 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 OR8K5Q8NH50 307 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MR1Q95460 341 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CNDP1Q96KN2 507 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 C9orf72Q96LT7 481 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MAGEB10Q96LZ2 347 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 AGAP4Q96P64 663 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TAAR6Q96RI8 345 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 PPCSQ9HAB8 311 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 METTL5Q9NRN9 209 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TRNAU1APQ9NX07 287 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 GRHL1Q9NZI5 618 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 RARRES3Q9UL19 164 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 SONP18583 2426 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 HACD1B0YJ81 288 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CACNB4O00305 520 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 EIF3HO15372 352 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MST1P26927 711 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 SUOXP51687 545 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 EIF3BP55884 814 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 DAOAP59103 153 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 YWHAGP61981 247 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 GPS2Q13227 327 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TFDP2Q14188 446 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 SLMAPQ14BN4 828 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TUBB8Q3ZCM7 444 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MS4A13Q5J8X5 152 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MSANTD2Q6P1R3 559 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 TTC27Q6P3X3 843 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CCDC137Q6PK04 289 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 PCGF5Q86SE9 256 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MAP7D3Q8IWC1 876 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 ZZZ3Q8IYH5 903 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 PLD6Q8N2A8 252 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 JOSD2Q8TAC2 188 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 GOLPH3Q9H4A6 298 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 STN1Q9H668 368 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 ZBTB20Q9HC78 741 aaPredicted RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 MBNL1Q9NR56 388 aaKnown RBP6.49□□□□□ -1.37
CSTF3-201ENST00000323959 PSD3Q9NYI0 1048 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 CSAG2Q9Y5P2 127 aa6.49□□□□□ -1.37
CSTF3-201ENST00000323959 DOCK4Q8N1I0 1966 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TP73O15350 636 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 SASH3O75995 380 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 BEST1O76090 585 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 CD63P08962 238 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 RHOXF2BP0C7M4 288 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 MIPP30301 263 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 GUCY2DQ02846 1103 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 MFAP5Q13361 173 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 HYAL4Q2M3T9 481 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 OTUD1Q5VV17 481 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 RFWD3Q6PCD5 774 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 ARSKQ6UWY0 536 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 ZDHHC24Q6UX98 284 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 CCDC89Q8N998 374 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 RNF25Q96BH1 459 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 BTBD6Q96KE9 485 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 RHOXF2Q9BQY4 288 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TRIM7Q9C029 511 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 RASSF4Q9H2L5 321 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 POPDC2Q9HBU9 364 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 PCDH9Q9HC56 1237 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 DMRT3Q9NQL9 472 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 WASF2Q9Y6W5 498 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 V9GYY5 206 aaPredicted RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 DYSFO75923 2080 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TRIM64A6NGJ6 449 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TRIM64BA6NI03 449 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 DNAJC6O75061 913 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 TSPAN12O95859 305 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 GAS8O95995 478 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 CALCAP01258 141 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 ABHD2P08910 425 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 MYBL2P10244 700 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 IL1R2P27930 398 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 SDC4P31431 198 aa6.48□□□□□ -1.37
CSTF3-201ENST00000323959 STIP1P31948 543 aaKnown RBP6.48□□□□□ -1.37
CSTF3-201ENST00000323959 HNRNPH2P55795 449 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms