RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CAPNS2Q96L46 248 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 PPP3R2Q96LZ3 170 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 CGREF1Q99674 301 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 POLR3HQ9Y535 204 aaPredicted RBP13.54□□□□□ -0.24
ATG4C-201ENST00000317868 KIAA1549LQ6ZVL6 1849 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 SLC25A14O95258 325 aaPredicted RBP13.54□□□□□ -0.24
ATG4C-201ENST00000317868 CDH1P12830 882 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 GGT1P19440 569 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 SLC5A2P31639 672 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 KRT80Q6KB66 452 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 METTL3Q86U44 580 aaKnown RBP13.54□□□□□ -0.24
ATG4C-201ENST00000317868 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 DTWD1Q8N5C7 304 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
ATG4C-201ENST00000317868 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 NTN4Q9HB63 628 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 CLEC4EQ9ULY5 219 aa13.54□□□□□ -0.24
ATG4C-201ENST00000317868 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 S100BP04271 92 aaPredicted RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 SPAM1P38567 509 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CCL23P55773 120 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 SLC7A9P82251 487 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 LMAN2Q12907 356 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 FUT11Q495W5 492 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CDKL4Q5MAI5 379 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TXNDC8Q6A555 127 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 PAK6Q9NQU5 681 aaPredicted RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 INTS6Q9UL03 887 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 IGLV3-16A0A075B6K0 115 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TRBV5-3A0A0A0MS03 114 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 H0Y858 1186 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 H3BSA7 217 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 LILRB3O75022 631 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TULP3O75386 442 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 ASLP04424 464 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 EBLN1P0CF75 366 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CBSLP0DN79 551 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 EPORP19235 508 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 PCSK6P29122 969 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CBSP35520 551 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 EPHB3P54753 998 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 ADARB1P78563 741 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 NR6A1Q15406 480 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CHRNA6Q15825 494 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TAF12Q16514 161 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 DGKKQ5KSL6 1271 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 DDX53Q86TM3 631 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TMC8Q8IU68 726 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CLDN19Q8N6F1 224 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 ZNF583Q96ND8 569 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TLR9Q9NR96 1032 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 EI24O14681 340 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 HOXB9P17482 250 aaPredicted RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 GGT5P36269 586 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CDK9P50750 372 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 RBBP5Q15291 538 aaKnown RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 GRAMD4Q6IC98 578 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 IFNEQ86WN2 208 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 TNIP2Q8NFZ5 429 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 GTF2H4Q92759 462 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 CAAP1Q9H8G2 361 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 GORASP2Q9H8Y8 452 aa13.53□□□□□ -0.24
ATG4C-201ENST00000317868 SMPD3Q9NY59 655 aaPredicted RBP13.53□□□□□ -0.24
ATG4C-201ENST00000317868 DOCK6Q96HP0 2047 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 NPIPB15A6NHN6 443 aaPredicted RBP13.52□□□□□ -0.24
ATG4C-201ENST00000317868 NPIPB8E9PQR5 432 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 K7EPI3 171 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 EIF3FO00303 357 aaPredicted RBP13.52□□□□□ -0.24
ATG4C-201ENST00000317868 SLC28A1O00337 649 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 PRRG1O14668 218 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 TPST1O60507 370 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 NELFEP18615 380 aaKnown RBP13.52□□□□□ -0.24
ATG4C-201ENST00000317868 GKP32189 559 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 PRMT2P55345 433 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 MAD2L1Q13257 205 aaPredicted RBP13.52□□□□□ -0.24
ATG4C-201ENST00000317868 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.24
ATG4C-201ENST00000317868 GLYATQ6IB77 296 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 CNKSR3Q6P9H4 555 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 GAREM2Q75VX8 874 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.24
ATG4C-201ENST00000317868 GPR65Q8IYL9 337 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms