RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SPATA13Q96N96 652 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PCYT2Q99447 389 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 BBS2Q9BXC9 721 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 C6orf62Q9GZU0 229 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SPNS1Q9H2V7 528 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 MMP27Q9H306 513 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 ENTPD7Q9NQZ7 604 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 PRMT7Q9NVM4 692 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-201ENST00000316433 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 SNX6Q9UNH7 406 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 HSPB11Q9Y547 144 aa6.56□□□□□ -1.36
ZNF540-201ENST00000316433 HEATR9A2RTY3 570 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SOWAHBA6NEL2 793 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 STX7O15400 261 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 INMTO95050 263 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SNX4O95219 450 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TNNC2P02585 160 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 PFKMP08237 780 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 HOXB8P17481 243 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CRHBPP24387 322 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 LIMK2P53671 638 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 BACE1P56817 501 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SP2Q02086 613 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CREMQ03060 361 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 AMHR2Q16671 573 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 LRRC26Q2I0M4 334 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SETMARQ53H47 684 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 HES5Q5TA89 166 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 METTL7BQ6UX53 244 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 R3HCC1LQ7Z5L2 792 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NRARPQ7Z6K4 114 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TIGD4Q8IY51 512 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CCDC116Q8IYX3 515 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ADGRG2Q8IZP9 1017 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CRYBG2Q8N1P7 616 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 OR7G3Q8NG95 312 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 FAR1Q8WVX9 515 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TMEM176AQ96HP8 235 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 UBXN10Q96LJ8 280 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 PEBP4Q96S96 227 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 APOL4Q9BPW4 351 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NUAK2Q9H093 628 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ING2Q9H160 280 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CASS4Q9NQ75 786 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 GPRC5CQ9NQ84 441 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 OPTCQ9UBM4 332 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 GLS2Q9UI32 602 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CYTH4Q9UIA0 394 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SIX4Q9UIU6 781 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 OSGIN1Q9UJX0 560 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 USP22Q9UPT9 525 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SLC22A7Q9Y694 548 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 BBIP1A8MTZ0 92 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF99A8MXY4 864 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CHURC1-FNTBB4DL54 471 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TCP10L2B9ZVM9 353 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 K7ERI5 159 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 EI24O14681 340 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 C1QBP02746 253 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CFHP08603 1231 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ETS1P14921 441 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CCT3P49368 545 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 STARP49675 285 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NCS1P62166 190 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ADARB1P78563 741 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CYP4F8P98187 520 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF91Q05481 1191 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 PRKCDQ05655 676 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CLCA4Q14CN2 919 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZBTB6Q15916 424 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 DPY19L1Q2PZI1 675 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF404Q494X3 552 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZNF484Q5JVG2 852 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TIGD3Q6B0B8 471 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 LAMTOR1Q6IAA8 161 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 DENND1BQ6P3S1 775 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SPRED1Q7Z699 444 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 ZBTB8OSQ8IWT0 167 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 CAMKK1Q8N5S9 505 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TXNDC5Q8NBS9 432 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 PAPD5Q8NDF8 572 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 OR5B17Q8NGF7 314 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 OR52E4Q8NGH9 312 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SLC35F5Q8WV83 523 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 RNF34Q969K3 372 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 C18orf25Q96B23 403 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TMCO6Q96DC7 493 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 C11orf24Q96F05 449 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 RBM18Q96H35 190 aaKnown RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NEDD4LQ96PU5 975 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 NPAS1Q99742 590 aa6.55□□□□□ -1.36
ZNF540-201ENST00000316433 SOX17Q9H6I2 414 aaPredicted RBP6.55□□□□□ -1.36
ZNF540-201ENST00000316433 TDRD3Q9H7E2 651 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms