RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 VIPP01282 170 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 HSD11B1P28845 292 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 GTF2BQ00403 316 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 BORAQ6PGQ7 559 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 PLPPR4Q7Z2D5 763 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 ADAM2Q99965 735 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 YTHDF1Q9BYJ9 559 aaKnown RBP15.27■□□□□ 0.04
HCFC1-201ENST00000310441 DNAJB4Q9UDY4 337 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 OR2L2Q8NH16 312 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 AGAP2Q99490 1192 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 CIB1Q99828 191 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF69Q9UC07 566 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 CAPN15O75808 1086 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 PRKD3O94806 890 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 NOMO2Q5JPE7 1267 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 GAD1Q99259 594 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 CNOT6Q9ULM6 557 aaKnown RBP15.27■□□□□ 0.04
HCFC1-201ENST00000310441 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 ATP6AP2A0A1C7CYW4 349 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 TNFRSF10BO14763 440 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 ANXA3P12429 323 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 GRIA1P42261 906 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 BLKP51451 505 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 XAGE5Q8WWM1 108 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 DENND2DQ9H6A0 471 aaPredicted RBP15.27■□□□□ 0.04
HCFC1-201ENST00000310441 PMF1-BGLAPU3KQ54 211 aa15.27■□□□□ 0.04
HCFC1-201ENST00000310441 PCM1Q15154 2024 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 CRTC2Q53ET0 693 aaPredicted RBP15.27■□□□□ 0.03
HCFC1-201ENST00000310441 IDNKQ5T6J7 187 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 OGFRL1Q5TC84 451 aaPredicted RBP15.27■□□□□ 0.03
HCFC1-201ENST00000310441 TMPRSS4Q9NRS4 437 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 ARHGAP23Q9P227 1491 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 RAP2AP10114 183 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 MPIP34949 423 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 PPATQ06203 517 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 DLG2Q15700 870 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 INAVAQ3KP66 663 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 C6orf52Q5T4I8 152 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 MIR1-1HGQ9H1L0 117 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 TAS2R1Q9NYW7 299 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 DEPDC5O75140 1603 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 C15orf59Q2T9L4 293 aaPredicted RBP15.27■□□□□ 0.03
HCFC1-201ENST00000310441 SYCE2Q6PIF2 218 aa15.27■□□□□ 0.03
HCFC1-201ENST00000310441 FAM234BA2RU67 622 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ARL5CA6NH57 179 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 CDK10Q15131 360 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 CELF3Q5SZQ8 465 aaKnown RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 NKD1Q969G9 470 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 B3GNT4Q9C0J1 378 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TBC1D17Q9HA65 648 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 PLK2Q9NYY3 685 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 GJA1P17302 382 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 S100PP25815 95 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SEC23AQ15436 765 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SAMD7Q7Z3H4 446 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SUN3Q8TAQ9 357 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF514Q96K75 400 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 BPIFA1Q9NP55 256 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 C11orf16Q9NQ32 467 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 PLEKHA6Q9Y2H5 1048 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 A0A075B6Q4 140 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 RGL2O15211 777 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 FESP07332 822 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TLR1Q15399 786 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TRAM1Q15629 374 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 STOML3Q8TAV4 291 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 EIF2B3Q9NR50 452 aaKnown RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ANXA4P09525 319 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 DHRS1Q96LJ7 313 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TMEM121BQ9BXQ6 578 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 CXorf21Q9HAI6 301 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SPATA7Q9P0W8 599 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 FAM86B1E9PN63 330 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 NT5EP21589 574 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 MVKQ03426 396 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 C2orf80Q0P641 193 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 MCCC2Q9HCC0 563 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 MYPNQ86TC9 1320 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 DAPL1A0PJW8 107 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ADAMTS3O15072 1205 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TIGD6Q17RP2 521 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 ALG10BQ5I7T1 473 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SATL1Q86VE3 508 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SLC22A18Q96BI1 424 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 WDR37Q9Y2I8 494 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 PCDHGA11Q9Y5H2 935 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SPIN1Q9Y657 262 aaPredicted RBP15.26■□□□□ 0.03
HCFC1-201ENST00000310441 RP2O75695 350 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SASH3O75995 380 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 TAS2R43P59537 309 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 USP4Q13107 963 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 SP140Q13342 867 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 CTBP1Q13363 440 aa15.26■□□□□ 0.03
HCFC1-201ENST00000310441 MAB21L1Q13394 359 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms