RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 KAT8Q9H7Z6 458 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 AHSPQ9NZD4 102 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 TMA7Q9Y2S6 64 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 PRR23AA6NEV1 266 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ELNP15502 786 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 POLR2LP62875 67 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 LAPTM4AQ15012 233 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 NPTX1Q15818 432 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ATXN7L2Q5T6C5 722 aaPredicted RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 ANKRD49Q8WVL7 239 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 HDHD2Q9H0R4 259 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 H0Y858 1186 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 NME4O00746 187 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 CLPXO76031 633 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 MAPK8P45983 427 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 RFX3P48380 749 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 SH3BP2P78314 561 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 PIGFQ07326 219 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 SCAPQ12770 1279 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ZNF57Q68EA5 555 aaPredicted RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 GLB1L3Q8NCI6 653 aaPredicted RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 OR4F6Q8NGB9 312 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 REPS1Q96D71 796 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 INTS7Q9NVH2 962 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 KCTD5Q9NXV2 234 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 RIMS3Q9UJD0 308 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 TESMINQ9Y4I5 508 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 KPNA3O00505 521 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 TMCC2O75069 709 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 PABPC1P11940 636 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 ITGA2P17301 1181 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 GRK3P35626 688 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ATP4BP51164 291 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CDH4P55283 916 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 RAB15P59190 212 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CREB5Q02930 508 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ELP6Q0PNE2 266 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 LYPLAL1Q5VWZ2 237 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 TAPT1Q6NXT6 567 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ELMSAN1Q6PJG2 1045 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PTCHD4Q6ZW05 846 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 IFNL1Q8IU54 200 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 CMTR2Q8IYT2 770 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 CAPN10Q9HC96 672 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 TOR4AQ9NXH8 423 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 SATB2Q9UPW6 733 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 OR10H3O60404 316 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CCNKO75909 580 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 DIRAS1O95057 198 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PAPSS2O95340 614 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 BMP10O95393 424 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 S1PR4O95977 384 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 POU2F1P14859 743 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CD1DP15813 335 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 C6orf136Q5SQH8 315 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 MTRRQ9UBK8 725 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CNOT11Q9UKZ1 510 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 A0A1B0GVM2 712 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 PSMD11O00231 422 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 RPL10P27635 214 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 IL12RB1P42701 662 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PRKAG1P54619 331 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CRHR2Q13324 411 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 SKIV2LQ15477 1246 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 TGFBIQ15582 683 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 MS4A13Q5J8X5 152 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 SPANXN4Q5MJ08 99 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 SULT1C3Q6IMI6 304 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ITIH5Q86UX2 942 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 CLDN19Q8N6F1 224 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 ZNF420Q8TAQ5 688 aaPredicted RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 ATL1Q8WXF7 558 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 PYCR2Q96C36 320 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 MRPL9Q9BYD2 267 aaKnown RBP13.07□□□□□ -0.32
DDX54-201ENST00000306014 NLNQ9BYT8 704 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
DDX54-201ENST00000306014 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms