RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 THAP5Q7Z6K1 395 aa13.84□□□□□ -0.19
SDC2-201ENST00000302190 SCD5Q86SK9 330 aa13.84□□□□□ -0.19
SDC2-201ENST00000302190 ADAMTSL2Q86TH1 951 aa13.84□□□□□ -0.19
SDC2-201ENST00000302190 SERPINA9Q86WD7 417 aa13.84□□□□□ -0.19
SDC2-201ENST00000302190 DFNA5O60443 496 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 CHRNA1P02708 482 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 CD1DP15813 335 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 NNMTP40261 264 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 CRATP43155 626 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 RXRGP48443 463 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 FAM189BP81408 668 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 RELAQ04206 551 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 IL10RBQ08334 325 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 ACSM2AQ08AH3 577 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 SYT16Q17RD7 645 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 PARP15Q460N3 678 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 ACSM2BQ68CK6 577 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 GPR180Q86V85 440 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 DBF4BQ8NFT6 615 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 OR4F6Q8NGB9 312 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 ISOC1Q96CN7 298 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 IMP4Q96G21 291 aaKnown RBP13.83□□□□□ -0.19
SDC2-201ENST00000302190 MTERF1Q99551 399 aaKnown RBP13.83□□□□□ -0.19
SDC2-201ENST00000302190 MYOCQ99972 504 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 AARSD1Q9BTE6 412 aaKnown RBP13.83□□□□□ -0.19
SDC2-201ENST00000302190 GSTO2Q9H4Y5 243 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 TLR6Q9Y2C9 796 aa13.83□□□□□ -0.19
SDC2-201ENST00000302190 A0A1W2PP18 115 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 DENRO43583 198 aaKnown RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 ALDH1A1P00352 501 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 GPIP06744 558 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 GNPDA1P46926 289 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 STC1P52823 247 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 AHSA2Q719I0 299 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 SYVN1Q86TM6 617 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 TMEM132CQ8N3T6 1108 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 VPS37AQ8NEZ2 397 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 NAA50Q9GZZ1 169 aaKnown RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 LRTM1Q9HBL6 345 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 CMTM6Q9NX76 183 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 HCSTQ9UBK5 93 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 SHROOM3Q8TF72 1996 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ELOVL7A1L3X0 281 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 VILLO15195 856 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ACSL4O60488 711 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ANXA5P08758 320 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 DGKAP23743 735 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ATP6V1E1P36543 226 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 ARPC4P59998 168 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 SCAPQ12770 1279 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 PAGE2Q7Z2X7 111 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ZC3H7AQ8IWR0 971 aaKnown RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 PPP3R2Q96LZ3 170 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 DEFB118Q96PH6 123 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ZFYVE1Q9HBF4 777 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 ACTR3BQ9P1U1 418 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 TNPO3Q9Y5L0 923 aaKnown RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 GPC6Q9Y625 555 aaPredicted RBP13.83□□□□□ -0.2
SDC2-201ENST00000302190 MGAMO43451 1857 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 VCANP13611 3396 aa13.83□□□□□ -0.2
SDC2-201ENST00000302190 A0A0U1RQF3 1178 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 OR2AG2A6NM03 316 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 H3BNH8 94 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 GABRDO14764 452 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 SERPINA1P01009 418 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 GJA1P17302 382 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 C6orf136Q5SQH8 315 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 KCTD11Q693B1 232 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 ZNF549Q6P9A3 640 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 CLEC14AQ86T13 490 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 ERI1Q8IV48 349 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 SLC22A15Q8IZD6 547 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 AUTS2Q8WXX7 1259 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 ARPC5LQ9BPX5 153 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 MAGEL2Q9UJ55 1249 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 XYLBO75191 536 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 GJB5O95377 273 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 GLUD1P00367 558 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 SLC6A2P23975 617 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 TRAP1Q12931 704 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 KRTCAP2Q8N6L1 136 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 GANCQ8TET4 914 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 SLC13A3Q8WWT9 602 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 CGREF1Q99674 301 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 LRRC3Q9BY71 257 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 REXO4Q9GZR2 422 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 PALMDQ9NP74 551 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 SPO11Q9Y5K1 396 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 ST14Q9Y5Y6 855 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 C5orf58C9J3I9 102 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 SEPT4O43236 478 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 DUSP11O75319 330 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 SEC24AO95486 1093 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms