RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SLC25A51Q9H1U9 297 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 GOLGA8CPA6NN73 597 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 IQCF5A8MTL0 148 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 NOTOA8MTQ0 251 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 E9PAM4 449 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 VPS4BO75351 444 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 FDXRP22570 491 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 WARSP23381 471 aaKnown RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 PPP5CP53041 499 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 IHHQ14623 411 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 RFTN2Q52LD8 501 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 MARCH8Q5T0T0 291 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 CCBE1Q6UXH8 406 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 DLEU7Q6UYE1 221 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 ZFAND4Q86XD8 727 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 DCP2Q8IU60 420 aaKnown RBP14.44□□□□□ -0.1
COL6A2-201ENST00000300527 LYSMD2Q8IV50 215 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 EFHBQ8N7U6 833 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 MFSD1Q9H3U5 465 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 TRIM39Q9HCM9 518 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 BPIFA1Q9NP55 256 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 IFT52Q9Y366 437 aa14.44□□□□□ -0.1
COL6A2-201ENST00000300527 CENPFP49454 3210 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 ELOVL7A1L3X0 281 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 RGS10O43665 173 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 NUAK1O60285 661 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 UROSP10746 265 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 GRIK1P39086 918 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 TP53BP2Q13625 1128 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 OR8H2Q8N162 312 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 KRTCAP2Q8N6L1 136 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 PAF1Q8N7H5 531 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 MINDY2Q8NBR6 621 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 CDC26Q8NHZ8 85 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 PYCR2Q96C36 320 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 FAM120BQ96EK7 910 aaKnown RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF599Q96NL3 588 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 PAAF1Q9BRP4 392 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 KAT8Q9H7Z6 458 aaKnown RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 TAS2R13Q9NYV9 303 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 CDH9Q9ULB4 789 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 IPPQ9Y573 584 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 ACTL7AQ9Y615 435 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 PDZK1P1A8MUH7 402 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 TFECO14948 347 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 S100A5P33763 92 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 BMPR1AP36894 532 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 ZFP36L2P47974 494 aaKnown RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 RENBPP51606 427 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 CLCNKBP51801 687 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 PPP2R2BQ00005 443 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 SPANXN4Q5MJ08 99 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 CYP2U1Q7Z449 544 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 GPSM1Q86YR5 675 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 MMAAQ8IVH4 418 aaKnown RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 OR4L1Q8NH43 312 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 RHOXF1Q8NHV9 184 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 DYNC2LI1Q8TCX1 351 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 HOXD1Q9GZZ0 328 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 SMPD4Q9NXE4 827 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 AIREO43918 545 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 TLR5O60602 858 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 UPK1BO75841 260 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 FKBP9O95302 570 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 B3GALT4O96024 378 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 HNRNPFP52597 415 aaKnown RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 NUDT6P53370 316 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 LAIR1Q6GTX8 287 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 LETMD1Q6P1Q0 360 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 USP43Q70EL4 1123 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 FKBP9P1Q75LS8 142 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 MIB1Q86YT6 1006 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 EFHD2Q96C19 240 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-201ENST00000300527 SLC10A4Q96EP9 437 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 LINGO1Q96FE5 620 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 USE1Q9NZ43 259 aa14.43□□□□□ -0.1
COL6A2-201ENST00000300527 E5RI56 91 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 GPR39O43194 453 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 KERAO60938 352 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 PAPSS2O95340 614 aaPredicted RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF280AP59817 542 aaPredicted RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ERVPABLB-1P60509 514 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF691Q5VV52 312 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 Q6ZSR9 355 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 TOP6BLQ8N6T0 577 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 PIK3C3Q8NEB9 887 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 VMP1Q96GC9 406 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 SMARCD1Q96GM5 515 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 APOL5Q9BWW9 433 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 PARVBQ9HBI1 364 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 MRM3Q9HC36 420 aaKnown RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ADPRHL2Q9NX46 363 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 VNN3Q9NY84 501 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 UGT2A1Q9Y4X1 527 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ANGPTL3Q9Y5C1 460 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 NUP214P35658 2090 aaPredicted RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 OR1I1O60431 355 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 EIF2DP41214 584 aaKnown RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 CASP3P42574 277 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms