RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CNOT11Q9UKZ1 510 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
NCKIPSD-201ENST00000294129 SMIM31A0A1B0GVY4 71 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 LOC730098B7Z3J9 87 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 VILLO15195 856 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 BMP2P12643 396 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 ZNF23P17027 643 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 SERPINA4P29622 427 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 SPAM1P38567 509 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 LSAMPQ13449 338 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 POM121L1PQ3SYA9 428 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 KRTCAP2Q8N6L1 136 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 ANKFN1Q8N957 763 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 SLC22A17Q8WUG5 538 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 UHRF1Q96T88 793 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 TBCDQ9BTW9 1192 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 ZIM2Q9NZV7 527 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 CHD7Q9P2D1 2997 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 MBD1Q9UIS9 605 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 ANAPC2Q9UJX6 822 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 ZNF490Q9ULM2 529 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 CCL26Q9Y258 94 aa15.52■□□□□ 0.07
NCKIPSD-201ENST00000294129 H3BSA7 217 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 TGM5O43548 720 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 DFNA5O60443 496 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 SEC22BO75396 215 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 LRG1P02750 347 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 BOP1Q14137 746 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 PCBP2Q15366 365 aaKnown RBP eCLIP15.51■□□□□ 0.075e-7■■■■■ 29.1
NCKIPSD-201ENST00000294129 FAM174BQ3ZCQ3 159 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 ATP13A5Q4VNC0 1218 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 SLC39A5Q6ZMH5 540 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 CARM1Q86X55 608 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 TCEAL8Q8IYN2 117 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 FIG4Q92562 907 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 RMND5BQ96G75 393 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 YME1L1Q96TA2 773 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 CIDEBQ9UHD4 219 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 SLCO3A1Q9UIG8 710 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 ZNF821O75541 412 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 CRY1Q16526 586 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 PYCR3Q53H96 274 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 NHSL2Q5HYW2 709 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 GLYATQ6IB77 296 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 PPP4R4Q6NUP7 873 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 CRTC1Q6UUV9 634 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 ITIH5Q86UX2 942 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 TRPV3Q8NET8 790 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 BIRC7Q96CA5 298 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 DGCR14Q96DF8 476 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 THUMPD3Q9BV44 507 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 HCFC1R1Q9NWW0 138 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 ARL15Q9NXU5 204 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 DNMT3BQ9UBC3 853 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 MYRFQ9Y2G1 1151 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 CCL16O15467 120 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 H6PDO95479 791 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 HRH2P25021 359 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 PPP3CCP48454 512 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 NEK2P51955 445 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 TMEM214Q6NUQ4 689 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 NXPE1Q8N323 547 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 LIX1Q8N485 282 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 DUS3LQ96G46 650 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 OLAHQ9NV23 265 aa15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 KIAA1522Q9P206 1035 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 PTBP2Q9UKA9 531 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-201ENST00000294129 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 KANSL1LA0AUZ9 987 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 ULK1O75385 1050 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 SRCP12931 536 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 WEE1P30291 646 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 HLA-FP30511 346 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 AKT1P31749 480 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 TXNL4AP83876 142 aaKnown RBP15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 FOXM1Q08050 763 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 ZIK1Q3SY52 487 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 HID1Q8IV36 788 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 ACDQ96AP0 544 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 CENPNQ96H22 339 aaPredicted RBP15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 NSMCE2Q96MF7 247 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 ADI1Q9BV57 179 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 ACTR8Q9H981 624 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 OARD1Q9Y530 152 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 EMX2Q04743 252 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 SPANXN4Q5MJ08 99 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 CNKSR3Q6P9H4 555 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 SLC22A15Q8IZD6 547 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 DTWD1Q8N5C7 304 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 PDPRQ8NCN5 879 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 FBXO30Q8TB52 745 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 RHBDF1Q96CC6 855 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 CHID1Q9BWS9 393 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 LRRC3Q9BY71 257 aa15.5■□□□□ 0.07
NCKIPSD-201ENST00000294129 CD244Q9BZW8 370 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms