RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SERPINA1P01009 418 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 C1QCP02747 245 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 ATXN1LP0C7T5 689 aaKnown RBP12.71□□□□□ -0.37
COL8A1-202ENST00000273342 GDF5P43026 501 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 LHX1P48742 406 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 SETMARQ53H47 684 aaPredicted RBP12.71□□□□□ -0.37
COL8A1-202ENST00000273342 AGAP7PQ5VUJ5 663 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 OR4K2Q8NGD2 314 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 KIAA1191Q96A73 305 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 UGT2B28Q9BY64 529 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.37
COL8A1-202ENST00000273342 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
COL8A1-202ENST00000273342 A0A0G2JLL6 359 aaPredicted RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 SNPHO15079 494 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 TULP3O75386 442 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 PGLSO95336 258 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 MLYCDO95822 493 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 MASP1P48740 699 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 CBX2Q14781 532 aaPredicted RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 ABRAXAS2Q15018 415 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 RAP1GAP2Q684P5 730 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 AHSA2Q719I0 299 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 PRRT2Q7Z6L0 340 aaPredicted RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 EID3Q8N140 333 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 OR6Q1Q8NGQ2 317 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 MCFD2Q8NI22 146 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 ISG20Q96AZ6 181 aaKnown RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 LINGO1Q96FE5 620 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 RBM4BQ9BQ04 359 aaKnown RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 RBM4Q9BWF3 364 aaKnown RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 MUC13Q9H3R2 512 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 TFB2MQ9H5Q4 396 aaKnown RBP12.71□□□□□ -0.38
COL8A1-202ENST00000273342 OSER1Q9NX31 292 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 SMPD4Q9NXE4 827 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 C3orf18Q9UK00 162 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 MED16Q9Y2X0 877 aa12.71□□□□□ -0.38
COL8A1-202ENST00000273342 CXCR6O00574 342 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TNPO2O14787 897 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TLR5O60602 858 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CD40LGP29965 261 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CLK1P49759 484 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 STC1P52823 247 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 EPS8Q12929 822 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CLCA4Q14CN2 919 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 HIST2H2ACQ16777 129 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 SPANXN4Q5MJ08 99 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 BEND5Q7L4P6 421 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 B3GNT8Q7Z7M8 397 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 DCP2Q8IU60 420 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CCDC103Q8IW40 242 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CFAP52Q8N1V2 620 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TTC30BQ8N4P2 665 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 EFHBQ8N7U6 833 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 NETO1Q8TDF5 533 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 PYCR2Q96C36 320 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ZHX1-C8orf76Q96EF9 292 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 RTP3Q9BQQ7 232 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 RNF167Q9H6Y7 350 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ANKMY1Q9P2S6 941 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ORC6Q9Y5N6 252 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 LOC100506127A0A0U1RQW1 187 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 LINC00854A0A1B0GVQ3 168 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TYW5A2RUC4 315 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 DNTTP04053 509 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CD6P30203 668 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 GPR15P49685 360 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 COPZ1P61923 177 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 BCL2A1Q16548 175 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 MAPKAPK3Q16644 382 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 COQ5Q5HYK3 327 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 LRRC8DQ7L1W4 858 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 AKAP14Q86UN6 197 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CYP4Z1Q86W10 505 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 GPSM1Q86YR5 675 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ARMC8Q8IUR7 673 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 KLHDC8BQ8IXV7 354 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ARRDC2Q8TBH0 407 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 CDKN2AIPNLQ96HQ2 116 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF641Q96N77 438 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 DSN1Q9H410 356 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 ERVK-11Q9UQG0 969 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 TSC2P49815 1807 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 A8MV72 311 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 VPS4BO75351 444 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 THP07101 528 aa12.7□□□□□ -0.38
COL8A1-202ENST00000273342 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
COL8A1-202ENST00000273342 PRR35P0CG20 571 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms