RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RELTQ969Z4 430 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 SLC22A12Q96S37 553 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 KATNBL1Q9H079 304 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 SMURF2Q9HAU4 748 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 IMP3Q9NV31 184 aaKnown RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 OGDHLQ9ULD0 1010 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 H3BM21 787 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 TPST2O60704 377 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 RSL1D1O76021 490 aaKnown RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 RECQL5O94762 991 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 EIF2S1P05198 315 aaKnown RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 DDX5P17844 614 aaKnown RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 SFRP1Q8N474 314 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 ASZ1Q8WWH4 475 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 KIAA1191Q96A73 305 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 CENPNQ96H22 339 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 KCTD5Q9NXV2 234 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 KNTC1P50748 2209 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 B4GALT3O60512 393 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 BCAS2O75934 225 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 ERVK-8P63133 956 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 CHSY3Q70JA7 882 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 TBC1D21Q8IYX1 336 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 ADGRG2Q8IZP9 1017 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 SMPD3Q9NY59 655 aaPredicted RBP14.35□□□□□ -0.11
CNOT9-201ENST00000273064 DUSP12Q9UNI6 340 aa14.35□□□□□ -0.11
CNOT9-201ENST00000273064 LCHNA4D1U4 455 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 DFNA5O60443 496 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TGFB1P01137 390 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 ANXA4P09525 319 aaPredicted RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SLC7A1P30825 629 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 APLP1P51693 650 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TLDC1Q6P9B6 456 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 CCDC149Q6ZUS6 474 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 ARHGAP22Q7Z5H3 698 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 OR5AK3PQ8NH89 298 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 ZFYVE19Q96K21 471 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SLC29A1Q99808 456 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 CXorf21Q9HAI6 301 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 IGSF5Q9NSI5 407 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SLAMF8Q9P0V8 285 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TRMUO75648 421 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SERPINA1P01009 418 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 CYP2A6P11509 494 aaPredicted RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 CAPN3P20807 821 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TRPC1P48995 793 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 NFKB2Q00653 900 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 PRKCQQ04759 706 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SF1Q15637 639 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 ADRM1Q16186 407 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 CYS1Q717R9 158 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 GOLGA7Q7Z5G4 137 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SPATA19Q7Z5L4 167 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SLC15A3Q8IY34 581 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 PLEKHA8Q96JA3 519 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 RIOK2Q9BVS4 552 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SUV39H2Q9H5I1 410 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 FARSBQ9NSD9 589 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 INTS10Q9NVR2 710 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TMCC3Q9ULS5 477 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 PCDHB1Q9Y5F3 818 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 OAZ2O95190 189 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 DBTP11182 482 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 SUSD1Q6UWL2 747 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 HEATR4Q86WZ0 1026 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 VANGL1Q8TAA9 524 aaPredicted RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 PAWRQ96IZ0 340 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
CNOT9-201ENST00000273064 DNAJC11Q9NVH1 559 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 COQ6Q9Y2Z9 468 aa14.34□□□□□ -0.11
CNOT9-201ENST00000273064 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 M0QZQ0 153 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 MAGEA3P43357 314 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 NTHL1P78549 312 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 DCTN2Q13561 401 aaKnown RBP14.33□□□□□ -0.11
CNOT9-201ENST00000273064 DPY19L3Q6ZPD9 716 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.11
CNOT9-201ENST00000273064 C12orf76Q8N812 135 aaPredicted RBP14.33□□□□□ -0.11
CNOT9-201ENST00000273064 OR2AG1Q9H205 316 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 TPK1Q9H3S4 243 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 C3orf18Q9UK00 162 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 COMMD3-BMI1R4GMX3 469 aa14.33□□□□□ -0.11
CNOT9-201ENST00000273064 TRIP12Q14669 1992 aaPredicted RBP14.33□□□□□ -0.12
CNOT9-201ENST00000273064 RREB1Q92766 1687 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 SLC28A1O00337 649 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 EPHX1P07099 455 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 C21orf59P57076 290 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 RPS14P62263 151 aaKnown RBP14.33□□□□□ -0.12
CNOT9-201ENST00000273064 LY6G5CQ5SRR4 150 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
CNOT9-201ENST00000273064 FLCNQ8NFG4 579 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms