RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SCN1AP35498 2009 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 MATN3O15232 486 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 MATN1P21941 496 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 STOMP27105 288 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 SHQ1Q6PI26 577 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 SIMC1Q8NDZ2 872 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 MOSPD2Q8NHP6 518 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 CLP1Q92989 425 aaKnown RBP11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 MAPKAP1Q9BPZ7 522 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 NLNQ9BYT8 704 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 MYOZ2Q9NPC6 264 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 ANKMY1Q9P2S6 941 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 PCDHGB6Q9Y5F9 930 aa11.52□□□□□ -0.57
DNMT3A-201ENST00000264709 PIP5K1BO14986 540 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AMHP03971 560 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AMHR2Q16671 573 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 BLOC1S3Q6QNY0 202 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 EEF1AKMT1Q8WVE0 214 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 HYLS1Q96M11 299 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 MLXQ9UH92 298 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TEX51A0A1B0GUA7 166 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CPSF4O95639 269 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CRYZL1O95825 349 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GRM5P41594 1212 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 BMXP51813 675 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 MSANTD1Q6ZTZ1 278 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GDPD1Q8N9F7 314 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 LGALS12Q96DT0 336 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 FUNDC2Q9BWH2 189 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SMURF2Q9HAU4 748 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 FOLH1BQ9HBA9 442 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ZFP14Q9HCL3 533 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TRPS1Q9UHF7 1281 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 PRSS51A0A1B0GVH4 220 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 OR10H3O60404 316 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 UPK1BO75841 260 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CLDN9O95484 217 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 NOS3P29474 1203 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CRATP43155 626 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GSTM4Q03013 218 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CLEC6AQ6EIG7 209 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ZFPM1Q8IX07 1006 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CPQQ9Y646 472 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 DOT1LQ8TEK3 1739 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 LCHNA4D1U4 455 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SMIM22K7EJ46 135 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 NDST3O95803 873 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ANXA3P12429 323 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 PTGER3P43115 390 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 USP39Q53GS9 565 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AGAP6Q5VW22 663 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 UFD1Q92890 307 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AGAP4Q96P64 663 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 DSN1Q9H410 356 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AKTIPQ9H8T0 292 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 MAFBQ9Y5Q3 323 aaPredicted RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 STK25O00506 426 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 METTL18O95568 372 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CD48P09326 243 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC16A1P53985 500 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 PTSQ03393 145 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 CAMK1Q14012 370 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 RABL3Q5HYI8 236 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GLIS1Q8NBF1 620 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 NR4A3Q92570 626 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 FDXACB1Q9BRP7 624 aaPredicted RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TMEM246Q9BRR3 403 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 EXD2Q9NVH0 621 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 PCDHGA3Q9Y5H0 932 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 EPOP01588 193 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 VARSP26640 1264 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GPC1P35052 558 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ALDH6A1Q02252 535 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 GALNT3Q14435 633 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 BIRC7Q96CA5 298 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 FBXL20Q96IG2 436 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ABCG2Q9UNQ0 655 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SYNDIG1LA6NDD5 238 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TSPAN4O14817 238 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 RECQL4O94761 1208 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AKR1D1P51857 326 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SRP54P61011 504 aaKnown RBP11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ZBTB46Q86UZ6 589 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 SPPL2BQ8TCT7 592 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 BRSK1Q8TDC3 778 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 AZIN2Q96A70 460 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 C1orf109Q9NX04 203 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 ZMYM5Q9UJ78 669 aa11.51□□□□□ -0.57
DNMT3A-201ENST00000264709 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms