RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SNX6Q9UNH7 406 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 MAGED1Q9Y5V3 778 aaPredicted RBP14.87□□□□□ -0.03
CASC3-201ENST00000264645 C12orf71A8MTZ7 269 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 LGALS2P05162 132 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 PAICSP22234 425 aaKnown RBP14.87□□□□□ -0.03
CASC3-201ENST00000264645 CCNCP24863 283 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 GMPSP49915 693 aaPredicted RBP14.87□□□□□ -0.03
CASC3-201ENST00000264645 CRY2Q49AN0 593 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 C9orf57Q5W0N0 161 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 STEAP4Q687X5 459 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 DESI1Q6ICB0 168 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 TMEM135Q86UB9 458 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 WDR83Q9BRX9 315 aaKnown RBP14.87□□□□□ -0.03
CASC3-201ENST00000264645 MROH8Q9H579 483 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 HSFX1Q9UBD0 423 aa14.87□□□□□ -0.03
CASC3-201ENST00000264645 ENPP3O14638 875 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 HCRTO43612 131 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 NUAK1O60285 661 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 TLR5O60602 858 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ERN1O75460 977 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 C1RP00736 705 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 AGXTP21549 392 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ZNF45Q02386 682 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 CXCL9Q07325 125 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 NOL9Q5SY16 702 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 PDE12Q6L8Q7 609 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 GPR156Q8NFN8 814 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 TSPAN18Q96SJ8 248 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ACAT2Q9BWD1 397 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 XYLT2Q9H1B5 865 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 WDR6Q9NNW5 1121 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 ABCC13Q9NSE7 274 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 PCDH10Q9P2E7 1040 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 SIX4Q9UIU6 781 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 CLEC4AQ9UMR7 237 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 SMIM30A4D0T7 59 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ARVCFO00192 962 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 SLC7A4O43246 635 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ORC5O43913 435 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 DGKAP23743 735 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 AIF1P55008 147 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 HUNKP57058 714 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 HIST2H2ACQ16777 129 aaPredicted RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 INTS6LQ5JSJ4 861 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 WDR45BQ5MNZ6 344 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 HIST2H2AA3Q6FI13 130 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 DSG4Q86SJ6 1040 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 SPARTQ8N0X7 666 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 TMEM203Q969S6 136 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 TMLHEQ9NVH6 421 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ANKMY1Q9P2S6 941 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 PRAMEF33A0A0G2JMD5 474 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 PRAMEF10O60809 474 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ALDH1A2O94788 518 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 PGK1P00558 417 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 ITGB1P05556 798 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 DCKP27707 260 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 MC4RP32245 332 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 HTR2BP41595 481 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 CLCA4Q14CN2 919 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 OR2T5Q6IEZ7 315 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 TP53INP2Q8IXH6 220 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 OR2T29Q8NH02 315 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 NSUN5Q96P11 429 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 POLR2J2Q9GZM3 115 aaKnown RBP14.86□□□□□ -0.03
CASC3-201ENST00000264645 ASB8Q9H765 288 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 C1orf109Q9NX04 203 aa14.86□□□□□ -0.03
CASC3-201ENST00000264645 CENPBD1B2RD01 187 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 RPP40O75818 363 aaKnown RBP14.85□□□□□ -0.03
CASC3-201ENST00000264645 FGF1P05230 155 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 G6PDP11413 515 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 CAPN3P20807 821 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 CYP3A5P20815 502 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 SLC6A2P23975 617 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 DGKEP52429 567 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 SLC36A3Q495N2 470 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 LCN8Q6JVE9 175 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 LGI2Q8N0V4 545 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 MINDY1Q8N5J2 469 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 MFSD2AQ8NA29 543 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 B3GALT6Q96L58 329 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 FRMD6Q96NE9 622 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 PDZD7Q9H5P4 517 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 ITM2BQ9Y287 266 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 LYVE1Q9Y5Y7 322 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 TCRBV3S1A0A5B6 114 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 LRRC14BA6NHZ5 514 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 KPNA5O15131 536 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 MATN3O15232 486 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 PEX10O60683 326 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 ITGA2P17301 1181 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 CD247P20963 164 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 SLC9A3P48764 834 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 PTSQ03393 145 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 PHACTR4Q8IZ21 702 aa14.85□□□□□ -0.03
CASC3-201ENST00000264645 ZNF671Q8TAW3 534 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms