RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 UGT2B28Q9BY64 529 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 ARNT2Q9HBZ2 717 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 TAS2R13Q9NYV9 303 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 TYW5A2RUC4 315 aaKnown RBP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 VPS4BO75351 444 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 GTF2E2P29084 291 aaKnown RBP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 ACVRL1P37023 503 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 HMGCS1Q01581 520 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 SETMARQ53H47 684 aaPredicted RBP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 XKR7Q5GH72 579 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 DEPDC1Q5TB30 811 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 KRTCAP2Q8N6L1 136 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 ZNF540Q8NDQ6 660 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 RMDN1Q96DB5 314 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 SMPD4Q9NXE4 827 aa15.66■□□□□ 0.1
LMNB1-201ENST00000261366 INTS6Q9UL03 887 aaKnown RBP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 PDCD11Q14690 1871 aaKnown RBP15.66■□□□□ 0.1
LMNB1-201ENST00000261366 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 NDUFB5O43674 189 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MT-ND2P03891 347 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 LCKP06239 509 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 PRR35P0CG20 571 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 EPHA2P29317 976 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 DCTP40126 519 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 STC1P52823 247 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ATAD3BQ5T9A4 648 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ANKRD46Q86W74 232 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 EID3Q8N140 333 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 C10orf111Q8N326 155 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 OR4K2Q8NGD2 314 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 LINGO1Q96FE5 620 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ZNF641Q96N77 438 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RBM4BQ9BQ04 359 aaKnown RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RTP3Q9BQQ7 232 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RBM4Q9BWF3 364 aaKnown RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ASPSCR1Q9BZE9 553 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 BRINP2Q9C0B6 783 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 AMBNQ9NP70 447 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 C3orf18Q9UK00 162 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CDH9Q9ULB4 789 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 VPS4AQ9UN37 437 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MED16Q9Y2X0 877 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CAB39Q9Y376 341 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ORC6Q9Y5N6 252 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 SERPINA1P01009 418 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 THP07101 528 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RPS17P08708 135 aaKnown RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ITIH1P19827 911 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 SLC26A3P40879 764 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ZNF135P52742 658 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ADAM17P78536 824 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MANEALQ5VSG8 457 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RAP1GAP2Q684P5 730 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 OR56A4Q8NGH8 313 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 OR6Q1Q8NGQ2 317 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 OR10T2Q8NGX3 314 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RHEBL1Q8TAI7 183 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 S100ZQ8WXG8 99 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MTFMTQ96DP5 389 aaKnown RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 TPK1Q9H3S4 243 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 VTA1Q9NP79 307 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 OSER1Q9NX31 292 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 VNN3Q9NY84 501 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 PCDHB14Q9Y5E9 798 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ZNF236Q9UL36 1845 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 TRIP12Q14669 1992 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CXCR6O00574 342 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 RPP40O75818 363 aaKnown RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ZNF682O95780 498 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MYCLP1P12525 358 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CD40LGP29965 261 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MASP1P48740 699 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ABRAXAS2Q15018 415 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CCDC80Q76M96 950 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 BEND5Q7L4P6 421 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 B3GNT8Q7Z7M8 397 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 GPSM1Q86YR5 675 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 SYTL1Q8IYJ3 562 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 FAM83FQ8NEG4 500 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ARRDC2Q8TBH0 407 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 CDKN2AIPNLQ96HQ2 116 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ZBTB20Q9HC78 741 aaPredicted RBP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ATP13A1Q9HD20 1204 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 SLC6A13Q9NSD5 602 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.65■□□□□ 0.1
LMNB1-201ENST00000261366 ANKMY1Q9P2S6 941 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 PTCH2Q9Y6C5 1203 aa15.65■□□□□ 0.1
LMNB1-201ENST00000261366 GABARAPO95166 117 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 SPNP16150 400 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 PCSK1P29120 753 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 SERPINB10P48595 397 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 NEK2P51955 445 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 BEX3Q00994 111 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 BCL2A1Q16548 175 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 HIST2H2ACQ16777 129 aaPredicted RBP15.64■□□□□ 0.09
LMNB1-201ENST00000261366 SPANXN4Q5MJ08 99 aa15.64■□□□□ 0.09
LMNB1-201ENST00000261366 SCD5Q86SK9 330 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms