RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GIMAP2Q9UG22 337 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 OSGIN1Q9UJX0 560 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 POU2F3Q9UKI9 436 aa4.22□□□□□ -1.73
CCDC54-201ENST00000261058 PRSS51A0A1B0GVH4 220 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 A0A1W2PPM1 405 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 SYNGR3O43761 229 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 BMP10O95393 424 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 IGHV4-39P01824 125 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 GJA1P17302 382 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 ANP32AP39687 249 aaKnown RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 CAPZA2P47755 286 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 AMPHP49418 695 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 UBXN2AP68543 259 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 WASHC5Q12768 1159 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 SNAPC1Q16533 368 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 PIWIL4Q7Z3Z4 852 aaKnown RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 CAMKMTQ7Z624 323 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 PTOV1Q86YD1 416 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 MAML2Q8IZL2 1156 aaPredicted RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 L3MBTL4Q8NA19 623 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 XXYLT1Q8NBI6 393 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 RDM1Q8NG50 284 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 SPATA20Q8TB22 786 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 SPACA9Q96E40 222 aaPredicted RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 LINGO1Q96FE5 620 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 AP1M1Q9BXS5 423 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 OR10A4Q9H209 315 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 PRMT7Q9NVM4 692 aaPredicted RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 WDR35Q9P2L0 1181 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 ISY1Q9ULR0 285 aaKnown RBP4.21□□□□□ -1.73
CCDC54-201ENST00000261058 CCL27Q9Y4X3 112 aa4.21□□□□□ -1.73
CCDC54-201ENST00000261058 DENND3A2RUS2 1198 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 ANKUB1A6NFN9 424 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 SPRY1O43609 319 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 BAG4O95429 457 aaKnown RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 TFAP2AP05549 437 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 FYNP06241 537 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 LINGO3P0C6S8 592 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 DGKAP23743 735 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 RAD23AP54725 363 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 HNRNPKP61978 463 aaKnown RBP eCLIP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 ZRSR1Q15695 479 aaKnown RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 SLC10A5Q5PT55 438 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 PACS1Q6VY07 963 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 CEP57L1Q8IYX8 460 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 OR2AJ1Q8NGZ0 328 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 EXD1Q8NHP7 514 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 AFAP1L1Q8TED9 768 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 OXNAD1Q96HP4 312 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 LINC00615Q96LM1 132 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 FAM81BQ96LP2 452 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 CFAP57Q96MR6 1250 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 MYCBPQ99417 103 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 BAG1Q99933 345 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 ABHD6Q9BV23 337 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 DPAGT1Q9H3H5 408 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 RABEP2Q9H5N1 569 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 CFDP1Q9UEE9 299 aaPredicted RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 DDX25Q9UHL0 483 aaKnown RBP4.21□□□□□ -1.74
CCDC54-201ENST00000261058 KCNG2Q9UJ96 466 aa4.21□□□□□ -1.74
CCDC54-201ENST00000261058 SOS1Q07889 1333 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 A0A1W2PPI3 338 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 GTPBP10A4D1E9 387 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 EME2A4GXA9 379 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 PRR32B1ATL7 298 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 H7C0S8 307 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 CTSVO60911 334 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 C22orf31O95567 290 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 BAG2O95816 211 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 LIPFP07098 398 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 MYBL1P10243 752 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 PFKFB1P16118 471 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 TKTP29401 623 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 OAS2P29728 719 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 HOXC13P31276 330 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 IL15P40933 162 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 POU3F1Q03052 451 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 PRPF4BQ13523 1007 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 KIR2DS3Q14952 304 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 HSP90AB3PQ58FF7 597 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 RNASEH2BQ5TBB1 312 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 IRAK1BP1Q5VVH5 260 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 KIAA1161Q6NSJ0 714 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 KLC3Q6P597 504 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 DGLUCYQ7Z3D6 616 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 EXOC3L1Q86VI1 746 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 TMEM173Q86WV6 379 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 EGFL6Q8IUX8 553 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 DCP1BQ8IZD4 617 aaKnown RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 KBTBD3Q8NAB2 608 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 SEMA4DQ92854 862 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 SCRN2Q96FV2 425 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 LRRC3BQ96PB8 259 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 CTAGE1Q96RT6 745 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 BTBD10Q9BSF8 475 aa4.2□□□□□ -1.74
CCDC54-201ENST00000261058 POLR3CQ9BUI4 534 aaPredicted RBP4.2□□□□□ -1.74
CCDC54-201ENST00000261058 WNT5BQ9H1J7 359 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms