RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HM13Q8TCT9 377 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 KCNJ9Q92806 393 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 SSU72Q9NP77 194 aaKnown RBP20.3■□□□□ 0.84
RTCA-201ENST00000260563 TAS2R13Q9NYV9 303 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 FAM8A1Q9UBU6 413 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 MED16Q9Y2X0 877 aa20.3■□□□□ 0.84
RTCA-201ENST00000260563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.29■□□□□ 0.84
RTCA-201ENST00000260563 MGAT4DA6NG13 374 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 E5RI56 91 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 FLRT2O43155 660 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 NIPSNAP2O75323 286 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 VPS26AO75436 327 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 C2P06681 752 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 CHRM3P20309 590 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 CD9P21926 228 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 CLCNKAP51800 687 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 PGGT1BP53609 377 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 ARHGAP8P85298 464 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 TIAL1Q01085 375 aaKnown RBP eCLIP20.29■□□□□ 0.84
RTCA-201ENST00000260563 DMPKQ09013 629 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 ZNF460Q14592 562 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 TAF1BQ53T94 588 aaPredicted RBP20.29■□□□□ 0.84
RTCA-201ENST00000260563 PPM1JQ5JR12 505 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 STPG1Q5TH74 334 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 BANPQ8N9N5 519 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 ELMO1Q92556 727 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 DUSP23Q9BVJ7 150 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 VPS11Q9H270 941 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 POPDC3Q9HBV1 291 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 NLGN3Q9NZ94 848 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 TAAR2Q9P1P5 351 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 TLK1Q9UKI8 766 aa20.29■□□□□ 0.84
RTCA-201ENST00000260563 ARID1BQ8NFD5 2236 aaPredicted RBP20.29■□□□□ 0.84
RTCA-201ENST00000260563 C17orf113A0A1B0GUU1 675 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 IQCF5A8MTL0 148 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 YY2O15391 372 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 SPAG7O75391 227 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 TRIM16O95361 564 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 SLC35E2BP0CK96 405 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 ITGB6P18564 788 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 NR1D1P20393 614 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 LIMK1P53667 647 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 PDAP1Q13442 181 aaKnown RBP20.28■□□□□ 0.84
RTCA-201ENST00000260563 NFE2L1Q14494 772 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 LVRNQ6Q4G3 990 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 PIM3Q86V86 326 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 KRT222Q8N1A0 295 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 LKAAEAR1Q8TD35 194 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 FAM136AQ96C01 138 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 APOPT1Q96IL0 206 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.28■□□□□ 0.84
RTCA-201ENST00000260563 GVINP1Q7Z2Y8 2422 aa20.28■□□□□ 0.84
RTCA-201ENST00000260563 A0A087X1B8 175 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 COPEO14579 308 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 TYROBPO43914 113 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 PLA2G5P39877 138 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 GRK6P43250 576 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 PPP2R2AP63151 447 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 BOP1Q14137 746 aaKnown RBP20.27■□□□□ 0.84
RTCA-201ENST00000260563 SYTL3Q4VX76 610 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 C6orf132Q5T0Z8 1188 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 UGT3A1Q6NUS8 523 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 FAM46DQ8NEK8 389 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 OR4C6Q8NH72 309 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 GPR21Q99679 349 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 SELENOSQ9BQE4 189 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 DPEP2Q9H4A9 486 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 COG4Q9H9E3 785 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 GPAMQ9HCL2 828 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 KCNK9Q9NPC2 374 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 MKS1Q9NXB0 559 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 GULP1Q9UBP9 304 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 ACOT9Q9Y305 439 aa20.27■□□□□ 0.84
RTCA-201ENST00000260563 B4DGG1 531 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 PRPF4O43172 522 aaKnown RBP eCLIP20.27■□□□□ 0.835e-7■■□□□ 12.7
RTCA-201ENST00000260563 SNX2O60749 519 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 WISP3O95389 354 aaPredicted RBP20.27■□□□□ 0.83
RTCA-201ENST00000260563 IDSP22304 550 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 SKIV2L2P42285 1042 aaKnown RBP20.27■□□□□ 0.83
RTCA-201ENST00000260563 CCT5P48643 541 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 CLCN7P51798 805 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 SEPT7Q16181 437 aaKnown RBP20.27■□□□□ 0.83
RTCA-201ENST00000260563 DBX2Q6ZNG2 339 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 CCDC91Q7Z6B0 441 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 CFAP206Q8IYR0 622 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 EID2Q8N6I1 236 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 NETO1Q8TDF5 533 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 GALPQ9UBC7 116 aa20.27■□□□□ 0.83
RTCA-201ENST00000260563 TRMT6Q9UJA5 497 aaKnown RBP20.27■□□□□ 0.83
RTCA-201ENST00000260563 TMEM120BA0PK00 339 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 PRR19A6NJB7 356 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 PDZK1P1A8MUH7 402 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 LIN7AO14910 233 aaPredicted RBP20.26■□□□□ 0.83
RTCA-201ENST00000260563 GIMD1P0DJR0 217 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 CD59P13987 128 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 CRHR1P34998 444 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 GMPRP36959 345 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 IRF9Q00978 393 aa20.26■□□□□ 0.83
RTCA-201ENST00000260563 ZCCHC8Q6NZY4 707 aaKnown RBP20.26■□□□□ 0.83
RTCA-201ENST00000260563 FAM83HQ6ZRV2 1179 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms