RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 PDZD3Q86UT5 571 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 TRIM48Q8IWZ4 208 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 RBM12BQ8IXT5 1001 aaKnown RBP22.32■■□□□ 1.16
APOE-201ENST00000252486 SLC22A15Q8IZD6 547 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 LILRA3Q8N6C8 439 aaPredicted RBP22.32■■□□□ 1.16
APOE-201ENST00000252486 UHMK1Q8TAS1 419 aaKnown RBP22.32■■□□□ 1.16
APOE-201ENST00000252486 SLC37A2Q8TED4 501 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 SH3KBP1Q96B97 665 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 CXorf40BQ96DE9 158 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 TSPAN17Q96FV3 270 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 ATXN7L3BQ96GX2 97 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 CAMK1GQ96NX5 476 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 GPR21Q99679 349 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 GPR22Q99680 433 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 RTKNQ9BST9 563 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 PPCSQ9HAB8 311 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 POT1Q9NUX5 634 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 PSMD13Q9UNM6 376 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 MED16Q9Y2X0 877 aa22.32■■□□□ 1.16
APOE-201ENST00000252486 GVINP1Q7Z2Y8 2422 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 NUDT21O43809 227 aaKnown RBP22.31■■□□□ 1.16
APOE-201ENST00000252486 ENO3P13929 434 aaPredicted RBP22.31■■□□□ 1.16
APOE-201ENST00000252486 GLB1P16278 677 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 MSH2P43246 934 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 PDAP1Q13442 181 aaKnown RBP22.31■■□□□ 1.16
APOE-201ENST00000252486 GBX1Q14549 363 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 LRRC8EQ6NSJ5 796 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 ARL14Q8N4G2 192 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 C12orf66Q96MD2 445 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 PAFAH2Q99487 392 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 EPB41L4BQ9H329 900 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 POPDC3Q9HBV1 291 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 CPNE7Q9UBL6 633 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 ZNF180Q9UJW8 692 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 CDYLQ9Y232 598 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 WDR37Q9Y2I8 494 aa22.31■■□□□ 1.16
APOE-201ENST00000252486 ARHGEF17Q96PE2 2063 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 EME2A4GXA9 379 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 CCDC151A5D8V7 595 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 ZW10O43264 779 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 VIPP01282 170 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 MTHFD1P11586 935 aaKnown RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 PNLIPP16233 465 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 FDXRP22570 491 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 ACP1P24666 158 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 CNTFP26441 200 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 PDHA2P29803 388 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 MAPK9P45984 424 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 RGS4P49798 205 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 CDKN2DP55273 166 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 CLCA4Q14CN2 919 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 UAP1Q16222 522 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 RPE65Q16518 533 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 RSPO4Q2I0M5 234 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 NAPRTQ6XQN6 538 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 NEK10Q6ZWH5 1172 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 MREGQ8N565 214 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 SIDT2Q8NBJ9 832 aaKnown RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 MYRIPQ8NFW9 859 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 CD200R1Q8TD46 325 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 ZFPM2Q8WW38 1151 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 PATE1Q8WXA2 126 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 FAM136AQ96C01 138 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 RMDN2Q96LZ7 410 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 SCHIP1Q9P0W5 487 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 COLEC10Q9Y6Z7 277 aa22.3■■□□□ 1.16
APOE-201ENST00000252486 ARID1BQ8NFD5 2236 aaPredicted RBP22.3■■□□□ 1.16
APOE-201ENST00000252486 LY6G6EA0A0G2JKS1 128 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 RHPN2P1A8MT19 583 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 POC1B-GALNT4F8VUJ3 575 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 CTIFO43310 598 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 ITGA2BP08514 1039 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 CEACAM1P13688 526 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 HSD17B3P37058 310 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 SLC19A1P41440 591 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 MAZP56270 477 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 UBE2IP63279 158 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 HHEXQ03014 270 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 USP10Q14694 798 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 TRIP6Q15654 476 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 LGSNQ5TDP6 509 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 DEFB124Q8NES8 71 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 TFGQ92734 400 aaPredicted RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 MRRFQ96E11 262 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 FOPNLQ96NB1 174 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 UCK1Q9HA47 277 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 IMP3Q9NV31 184 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 ZNF624Q9P2J8 865 aaPredicted RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 GALPQ9UBC7 116 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 SLC24A2Q9UI40 661 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 SLC39A10Q9ULF5 831 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 MTO1Q9Y2Z2 717 aaKnown RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 U3KQA8 63 aa22.29■■□□□ 1.16
APOE-201ENST00000252486 PTPRZ1P23471 2315 aaPredicted RBP22.29■■□□□ 1.16
APOE-201ENST00000252486 WDR87Q6ZQQ6 2873 aa22.28■■□□□ 1.16
APOE-201ENST00000252486 TRBV23OR9-2A0A075B6M9 112 aa22.28■■□□□ 1.16
APOE-201ENST00000252486 OR52A4PA6NMU1 304 aa22.28■■□□□ 1.16
APOE-201ENST00000252486 FAM155BO75949 473 aa22.28■■□□□ 1.16
APOE-201ENST00000252486 KRT38O76015 456 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms