RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FAM83EQ2M2I3 478 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 UAP1L1Q3KQV9 507 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LSM12Q3MHD2 195 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 AGAP9Q5VTM2 703 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MFSD14CQ5VZR4 134 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 OR52E8Q6IFG1 317 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CXCL17Q6UXB2 119 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SCD5Q86SK9 330 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SDCCAG8Q86SQ7 713 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PDSS2Q86YH6 399 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 RASAL3Q86YV0 1011 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 DCP1BQ8IZD4 617 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PGAM4Q8N0Y7 254 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 LSMEM2Q8N112 164 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KDM1BQ8NB78 822 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TRPV1Q8NER1 839 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SLC26A7Q8TE54 656 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 CASP10Q92851 521 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 IMP4Q96G21 291 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SLC39A13Q96H72 371 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TRMOQ9BU70 441 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 KLHL4Q9C0H6 718 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 FBXO44Q9H4M3 255 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 ZBTB26Q9HCK0 441 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 TRPC7Q9HCX4 862 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MRPL40Q9NQ50 206 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 UTP6Q9NYH9 597 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 DLGAP2Q9P1A6 1054 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 IPO11Q9UI26 975 aaKnown RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 MAGED2Q9UNF1 606 aaPredicted RBP7.83□□□□□ -1.16
CXCR4-201ENST00000241393 PSMD13Q9UNM6 376 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 HS3ST4Q9Y661 456 aa7.83□□□□□ -1.16
CXCR4-201ENST00000241393 SHROOM3Q8TF72 1996 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 IGLV3-10A0A075B6K4 115 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 LOC100653049A0A140TA62 436 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 SLC7A4O43246 635 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 MGEA5O60502 916 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 KRT34O76011 436 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 OAZ2O95190 189 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 PEX11BO96011 259 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 POMCP01189 267 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 LTA4HP09960 611 aaKnown RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 CD52P31358 61 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 WASP42768 502 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 MAGEA11P43364 429 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ABCG1P45844 678 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 LEPRP48357 1165 aaKnown RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 PSMD8P48556 350 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 PAPOLAP51003 745 aaKnown RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 WNT3AP56704 352 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TAS2R39P59534 338 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 IRX1P78414 480 aaPredicted RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 MPP1Q00013 466 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ITGA7Q13683 1181 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ODF1Q14990 250 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 MAPRE2Q15555 327 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 CNGA3Q16281 694 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TSTD2Q5T7W7 516 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ZNF470Q6ECI4 717 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 OGFOD2Q6N063 350 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 KLC3Q6P597 504 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 GAREM2Q75VX8 874 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 SNX32Q86XE0 403 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 SLC22A9Q8IVM8 553 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 DENND6AQ8IWF6 608 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ZNF683Q8IZ20 524 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 SLC25A41Q8N5S1 370 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TEX26Q8N6G2 289 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 LINC01356Q8N9X3 169 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 CATSPER1Q8NEC5 780 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 CEP70Q8NHQ1 597 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 SCAMP5Q8TAC9 235 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 UCMAQ8WVF2 138 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 HDAC10Q969S8 669 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TADA1Q96BN2 335 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 NXNL1Q96CM4 212 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ZNF419Q96HQ0 510 aaPredicted RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ELMO2Q96JJ3 720 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ZCWPW1Q9H0M4 648 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TRPV6Q9H1D0 765 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 EFCAB1Q9HAE3 211 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 CYP4F11Q9HBI6 524 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 EML4Q9HC35 981 aaKnown RBP7.82□□□□□ -1.16
CXCR4-201ENST00000241393 MAN1C1Q9NR34 630 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 TMEM248Q9NWD8 314 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 IL37Q9NZH6 218 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 ZDHHC2Q9UIJ5 367 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 RIMKLBQ9ULI2 386 aa7.82□□□□□ -1.16
CXCR4-201ENST00000241393 FAM92AA1XBS5 289 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 GOLGA8TH3BQL2 631 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 SEPT4O43236 478 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 NUAK1O60285 661 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 PMPCBO75439 489 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 PDE5AO76074 875 aa7.81□□□□□ -1.16
CXCR4-201ENST00000241393 FESP07332 822 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms