RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 ITGADQ13349 1161 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SEMA3AQ14563 771 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 AGKQ53H12 422 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 C1QTNF12Q5T7M4 302 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 CRTC1Q6UUV9 634 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 KIAA0408Q6ZU52 694 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 TMEM26Q6ZUK4 368 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 OR9I1Q8NGQ6 314 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 LPGAT1Q92604 370 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 GPR22Q99680 433 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 P2RY13Q9BPV8 354 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 TTYH1Q9H313 450 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 NOTCH4Q99466 2003 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 GFRA2O00451 464 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 CD247P20963 164 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 ETV3P41162 512 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 METAP1P53582 386 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 POU4F1Q01851 419 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 TCEA2Q15560 299 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 PIGGQ5H8A4 983 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 FGD3Q5JSP0 725 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SNX29P2Q8IUI4 249 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 ERI1Q8IV48 349 aaKnown RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 ACMSDQ8TDX5 336 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SCRN2Q96FV2 425 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 OLFM1Q99784 485 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 OSBPL6Q9BZF3 934 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 TBC1D23Q9NUY8 699 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 PKD2L2Q9NZM6 624 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 IL17CQ9P0M4 197 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 ALPK3Q96L96 1907 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 KCNH1O95259 989 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 BPIP17213 487 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SPAM1P38567 509 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 IL12RB1P42701 662 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 STC1P52823 247 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 MLLT1Q03111 559 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 HSPA14Q0VDF9 509 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 CARTPTQ16568 116 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SETMARQ53H47 684 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 NCCRP1Q6ZVX7 275 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 PARP8Q8N3A8 854 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 FSTL5Q8N475 847 aaPredicted RBP11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 CATSPER1Q8NEC5 780 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 RANBP9Q96S59 729 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 EPB41L1Q9H4G0 881 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 FAM83DQ9H4H8 585 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 IL26Q9NPH9 171 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 VPS9D1Q9Y2B5 631 aa11.53□□□□□ -0.56
TNFAIP1-201ENST00000226225 SUPT3HB4E1H0 165 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 HOXC11O43248 304 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 ATE1O95260 518 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 C21orf59P57076 290 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 PSME3P61289 254 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 PHEXP78562 749 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 PON2Q15165 354 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 BRAT1Q6PJG6 821 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 FRA10AC1Q70Z53 315 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 ISOC1Q96CN7 298 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 BOCQ9BWV1 1114 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 CEP44Q9C0F1 390 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 PLGRKTQ9HBL7 147 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 SARDHQ9UL12 918 aa11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 MTF2Q9Y483 593 aaPredicted RBP11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 COPG1Q9Y678 874 aaKnown RBP11.52□□□□□ -0.56
TNFAIP1-201ENST00000226225 K7EPI3 171 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 BTN3A1O00481 513 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PRMT5O14744 637 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 MMP20O60882 483 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 ZNF821O75541 412 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PKMP14618 531 aaKnown RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 CASP2P42575 452 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 RPL14P50914 215 aaKnown RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 ZNF140P52738 457 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 CDKN2DP55273 166 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 CACNG1Q06432 222 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 ZNF805Q5CZA5 627 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PERM1Q5SV97 790 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 ALG1LQ6GMV1 187 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PAQR3Q6TCH7 311 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 SIDT2Q8NBJ9 832 aaKnown RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 FBXL20Q96IG2 436 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 ZNF641Q96N77 438 aaPredicted RBP11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 COPS8Q99627 209 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 EGFL8Q99944 293 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 MARK1Q9P0L2 795 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 TSC22D4Q9Y3Q8 395 aa11.52□□□□□ -0.57
TNFAIP1-201ENST00000226225 PIAS3Q9Y6X2 628 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms