RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CRLS1Q9UJA2 301 aa21.6■■□□□ 1.05
SMARCD2-201ENST00000225742 POLR3HQ9Y535 204 aaPredicted RBP21.6■■□□□ 1.05
SMARCD2-201ENST00000225742 A0A0U1RQS6 177 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 A0A1B0GTW7 788 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 H3BSA7 217 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 GPR39O43194 453 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 GMNNO75496 209 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 KCNH1O95259 989 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 ANXA6P08133 673 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 CNPP09543 421 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 EBLN1P0CF75 366 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 RPS9P46781 194 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 OR4D2P58180 307 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 ESRRGP62508 458 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 TRIM46Q7Z4K8 759 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 DCBLD1Q8N8Z6 715 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 SCLYQ96I15 445 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 LYSMD1Q96S90 227 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 EGFL8Q99944 293 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 CHID1Q9BWS9 393 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 CPQQ9Y646 472 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 H0YAE9 185 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 K7EPI3 171 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 K7ERQ8 282 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 EIF3FO00303 357 aaPredicted RBP21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 CLOCKO15516 846 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 KATNA1O75449 491 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 AKT1P31749 480 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 HNF1BP35680 557 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 PRMT2P55345 433 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 APCDD1Q8J025 514 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 DNAJB8Q8NHS0 232 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 WFDC5Q8TCV5 224 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 LKAAEAR1Q8TD35 194 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 POP5Q969H6 163 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 RHBDF1Q96CC6 855 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 ZNF558Q96NG5 402 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 SH3GL1Q99961 368 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 BOCQ9BWV1 1114 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 TM6SF2Q9BZW4 377 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 KIAA1522Q9P206 1035 aaPredicted RBP21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 INSL5Q9Y5Q6 135 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 PRSS21Q9Y6M0 314 aa21.59■■□□□ 1.05
SMARCD2-201ENST00000225742 CARNS1A5YM72 827 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ZNF701M0R085 212 aaPredicted RBP21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 TRIM16O95361 564 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 SLC2A4P14672 509 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 BPIP17213 487 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 GGT1P19440 569 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ARHGEF6Q15052 776 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 MPPE1Q53F39 396 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 CACHD1Q5VU97 1274 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ABRAXAS1Q6UWZ7 409 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 PATL1Q86TB9 770 aaKnown RBP21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ERI1Q8IV48 349 aaKnown RBP21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 SLC39A11Q8N1S5 342 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 NXPE1Q8N323 547 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ARL14EPQ8N8R7 260 aaPredicted RBP21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 TMEM169Q96HH4 297 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ABCB8Q9NUT2 735 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 KCTD5Q9NXV2 234 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 FADS3Q9Y5Q0 445 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 ANKRD12Q6UB98 2062 aa21.58■■□□□ 1.05
SMARCD2-201ENST00000225742 COL4A6Q14031 1691 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 AGAP14A8MT82 685 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 EI24O14681 340 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 DEAF1O75398 565 aaPredicted RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 TRMUO75648 421 aaKnown RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 PRSS23O95084 383 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 CLDN7O95471 211 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 IL6P05231 212 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 SERPINA4P29622 427 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 GNPDA1P46926 289 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 CHRNA6Q15825 494 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 RFTN2Q52LD8 501 aaPredicted RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 FAM98BQ52LJ0 330 aaKnown RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ZNF786Q8N393 782 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 PAF1Q8N7H5 531 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 SLC13A3Q8WWT9 602 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 PPM1MQ96MI6 270 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 SLC22A12Q96S37 553 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 HIPK3Q9H422 1215 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 GORASP2Q9H8Y8 452 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 IL21Q9HBE4 155 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ZMYM5Q9UJ78 669 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 OBSL1O75147 1896 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 SMAD6O43541 496 aaKnown RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ULK1O75385 1050 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 GUCA1CO95843 209 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 URODP06132 367 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 RAP2AP10114 183 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 HOXB6P17509 224 aaKnown RBP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ITGB6P18564 788 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 SLC5A2P31639 672 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 ZBED5Q49AG3 693 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 TPGS1Q6ZTW0 290 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 USP51Q70EK9 711 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 HTR3DQ70Z44 454 aa21.57■■□□□ 1.04
SMARCD2-201ENST00000225742 OR52E4Q8NGH9 312 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms