RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KCTD4Q8WVF5 259 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 LINGO1Q96FE5 620 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 SLC13A1Q9BZW2 595 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 KCNH6Q9H252 994 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 CAAP1Q9H8G2 361 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 NMRAL1Q9HBL8 299 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 WASH6PQ9NQA3 447 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 ZNF358Q9NW07 568 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 GRID1Q9ULK0 1009 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
SEC61B-201ENST00000223641 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
SEC61B-201ENST00000223641 TDRD6O60522 2096 aaKnown RBP13.75□□□□□ -0.21
SEC61B-201ENST00000223641 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 LAMA1P25391 3075 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 A6NCN8 305 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 TARM1B6A8C7 271 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 GFYI3L273 518 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 COPEO14579 308 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ZBTB14O43829 449 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 IDSP22304 550 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 PREPP48147 710 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEC61B-201ENST00000223641 MPP2Q14168 576 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ACAP2Q15057 778 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ZNF423Q2M1K9 1284 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 HSP90B2PQ58FF3 399 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ZNF542PQ5EBM4 170 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 PLA2G2CQ5R387 149 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 LAIR1Q6GTX8 287 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 LVRNQ6Q4G3 990 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ABRAXAS1Q6UWZ7 409 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 PIWIL4Q7Z3Z4 852 aaKnown RBP13.74□□□□□ -0.21
SEC61B-201ENST00000223641 SPATA6LQ8N4H0 392 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 RHEBL1Q8TAI7 183 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ASB11Q8WXH4 323 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 KIAA1191Q96A73 305 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 PTERQ96BW5 349 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 LRRC61Q9BV99 259 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 IRF2BPLQ9H1B7 796 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 TFB2MQ9H5Q4 396 aaKnown RBP13.74□□□□□ -0.21
SEC61B-201ENST00000223641 DNAJC28Q9NX36 388 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 TMEM216Q9P0N5 145 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 APOBEC3BQ9UH17 382 aaKnown RBP13.74□□□□□ -0.21
SEC61B-201ENST00000223641 IKZF3Q9UKT9 509 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 EMCNQ9ULC0 261 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 SLC6A14Q9UN76 642 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 SMG5Q9UPR3 1016 aaKnown RBP13.74□□□□□ -0.21
SEC61B-201ENST00000223641 KCNK6Q9Y257 313 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 DNAJC16Q9Y2G8 782 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 PLLPQ9Y342 182 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 KNL1Q8NG31 2342 aa13.74□□□□□ -0.21
SEC61B-201ENST00000223641 ADAMTS9Q9P2N4 1935 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 H3BM21 787 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 SPAG7O75391 227 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 PSIP1O75475 530 aaKnown RBP13.73□□□□□ -0.21
SEC61B-201ENST00000223641 SBK3P0C264 359 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 AK4P27144 223 aaPredicted RBP13.73□□□□□ -0.21
SEC61B-201ENST00000223641 ETV4P43268 484 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 MAPK9P45984 424 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 ILF3Q12906 894 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEC61B-201ENST00000223641 GRIK2Q13002 908 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 SHBQ15464 509 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 LPAL2Q16609 132 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 SYTL3Q4VX76 610 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 PRRT3Q5FWE3 981 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 TECRLQ5HYJ1 363 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 SBSNQ6UWP8 590 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 PDZD3Q86UT5 571 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 MYO1HQ8N1T3 1032 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 FSTL5Q8N475 847 aaPredicted RBP13.73□□□□□ -0.21
SEC61B-201ENST00000223641 TCP10LQ8TDR4 215 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 DENND1AQ8TEH3 1009 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
SEC61B-201ENST00000223641 GSDMCQ9BYG8 508 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 ZDHHC5Q9C0B5 715 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 FAM8A1Q9UBU6 413 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 CACNA1HO95180 2353 aa13.73□□□□□ -0.21
SEC61B-201ENST00000223641 ARHGEF17Q96PE2 2063 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PATE3B3GLJ2 98 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CDC7O00311 574 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 SCAMP1O15126 338 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 TM9SF1O15321 606 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 SLC16A5O15375 505 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 DFNA5O60443 496 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PLIN3O60664 434 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PIAS2O75928 621 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PROCP04070 461 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CELA2BP08218 269 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CTSEP14091 401 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 TFEBP19484 476 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 RPA3P35244 121 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 MPLP40238 635 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 ACTR1BP42025 376 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 KCNC1P48547 511 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 KPNA2P52292 529 aaKnown RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 ACTR1AP61163 376 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CLCA4Q14CN2 919 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms