RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SBK3P0C264 359 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 SLC26A3P40879 764 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 TLE2Q04725 743 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 CHIT1Q13231 466 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 PROSER1Q86XN7 944 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 AQP12AQ8IXF9 295 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 FAM20BO75063 409 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 GLUD1P00367 558 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 CATP04040 527 aaKnown RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 ATXN1LP0C7T5 689 aaKnown RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 DNAJB1P25685 340 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 HIST2H2ACQ16777 129 aaPredicted RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 PAGE3Q5JUK9 113 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 HIST2H2AA3Q6FI13 130 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 ZNF513Q8N8E2 541 aaPredicted RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 TMIGD2Q96BF3 282 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 DACH2Q96NX9 599 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 GPR78Q96P69 363 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 NUSAP1Q9BXS6 441 aaKnown RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 KCTD5Q9NXV2 234 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 SAMHD1Q9Y3Z3 626 aaKnown RBP13.36□□□□□ -0.27
RAB3D-201ENST00000222120 THRBP10828 461 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 COL6A1P12109 1028 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 AP1S1P61966 158 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 RING1Q06587 406 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 ZFP28Q8NHY6 868 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 RORBQ92753 470 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 SLC39A13Q96H72 371 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 MIEF1Q9NQG6 463 aa13.36□□□□□ -0.27
RAB3D-201ENST00000222120 PRKD3O94806 890 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 SNAP29O95721 258 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 ACADVLP49748 655 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 IST1P53990 364 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 OR4D2P58180 307 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 ITGADQ13349 1161 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 CAMK2GQ13555 558 aaPredicted RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 RFTN1Q14699 578 aaPredicted RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 KCTD8Q6ZWB6 473 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 LARP4Q71RC2 724 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 MYEOVQ96EZ4 313 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 FEM1AQ9BSK4 669 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 WRAP53Q9BUR4 548 aaKnown RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 CACYBPQ9HB71 228 aaKnown RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 DYRK1BQ9Y463 629 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 DFNA5O60443 496 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 RSL1D1O76021 490 aaKnown RBP13.35□□□□□ -0.27
RAB3D-201ENST00000222120 C21orf59P57076 290 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 BROXQ5VW32 411 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 Q6ZVU0 165 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 RANBP9Q96S59 729 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 ARNT2Q9HBZ2 717 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 VPS4AQ9UN37 437 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 LINC00854A0A1B0GVQ3 168 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 K7EPI3 171 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 MAGEA12P43365 314 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 KIR3DL1P43629 444 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 MAPK8P45983 427 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 APCDD1Q8J025 514 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 NUDT8Q8WV74 236 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 UBXN10Q96LJ8 280 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 SLC30A3Q99726 388 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 SMURF2Q9HAU4 748 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 CMTM6Q9NX76 183 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 PTTG2Q9NZH5 202 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 PADI4Q9UM07 663 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
RAB3D-201ENST00000222120 NUP214P35658 2090 aaPredicted RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 H3BNX3 289 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 AGRPO00253 132 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SLC10A3P09131 477 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 SLC6A2P23975 617 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 NFKB2Q00653 900 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CYP4F3Q08477 520 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 LRP8Q14114 963 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 ABRAXAS2Q15018 415 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 CRTC3Q6UUV7 619 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 RHEBL1Q8TAI7 183 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 KCNJ9Q92806 393 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 TMBIM1Q969X1 311 aa13.34□□□□□ -0.27
RAB3D-201ENST00000222120 REXO5Q96IC2 774 aaKnown RBP13.34□□□□□ -0.27
RAB3D-201ENST00000222120 REEP1Q9H902 201 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms