RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 FAM13CQ8NE31 585 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 BRI3BPQ8WY22 251 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 IFT46Q9NQC8 304 aa10.41□□□□□ -0.74
TRPS1-201ENST00000220888 DUXAA6NLW8 204 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TP73O15350 636 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 BANF1O75531 89 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 ABHD2P08910 425 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 COL6A2P12110 1019 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 GMFBP60983 142 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 FOXK1P85037 733 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 ZNF844Q08AG5 666 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 BST1Q10588 318 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TRAP1Q12931 704 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CBX3Q13185 183 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 ZC3H14Q6PJT7 736 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CCDC80Q76M96 950 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CMC1Q7Z7K0 106 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 LNX1Q8TBB1 728 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CPXM1Q96SM3 734 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CORO1CQ9ULV4 474 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 MAN2B1O00754 1011 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SYNGR4O95473 234 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PRKAR1AP10644 381 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 ANPEPP15144 967 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PCSK2P16519 638 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TAF1AQ15573 450 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SLC9A4Q6AI14 798 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TTC27Q6P3X3 843 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CHRDL2Q6WN34 429 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 C10orf107Q8IVU9 208 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PSMG2Q969U7 264 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TP53INP1Q96A56 240 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TCF12Q99081 682 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 LRMDAQ9H2I8 198 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 POU2F3Q9UKI9 436 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 MADDQ8WXG6 1647 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 DIP2CQ9Y2E4 1556 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SOWAHBA6NEL2 793 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PRORSD1PA6NEY8 169 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 FGF18O76093 207 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PRKCHP24723 683 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SLC25A3Q00325 362 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 FSTL1Q12841 308 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PRKD1Q15139 912 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 QSOX2Q6ZRP7 698 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SYVN1Q86TM6 617 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 OXR1Q8N573 874 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 MEIOBQ8N635 442 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CPSF7Q8N684 471 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 C1orf127Q8N9H9 656 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 GLIS3Q8NEA6 775 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 POF1BQ8WVV4 589 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PTGES2Q9H7Z7 377 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CLEC4AQ9UMR7 237 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 NCANO14594 1321 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SLIT1O75093 1534 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 A0A0J9YYE9 177 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 GNB5O14775 395 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 PEX10O60683 326 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 SEC24AO95486 1093 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 GJA1P17302 382 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 POLR2JP52435 117 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 AP1S2P56377 157 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TAS2R40P59535 323 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 RPL6Q02878 288 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 HNRNPDQ14103 355 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 NOMO1Q15155 1222 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 ELOCQ15369 112 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 CXorf57Q6NSI4 855 aaKnown RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 DNAJC19Q96DA6 116 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 AGXT2Q9BYV1 514 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 TCAF1Q9Y4C2 921 aa10.4□□□□□ -0.74
TRPS1-201ENST00000220888 HEMK1Q9Y5R4 338 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-201ENST00000220888 GOT2P00505 430 aaKnown RBP10.4□□□□□ -0.75
TRPS1-201ENST00000220888 ALPPP05187 535 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 HEXBP07686 556 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 SPATA31C1P0DKV0 1188 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 ARL2P36404 184 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 NCBP2P52298 156 aaKnown RBP eCLIP10.4□□□□□ -0.75
TRPS1-201ENST00000220888 METTL21CQ5VZV1 264 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 SATL1Q86VE3 508 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 RFKQ969G6 155 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 RCN3Q96D15 328 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 ACSS3Q9H6R3 686 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 LRRC19Q9H756 370 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 GPN1Q9HCN4 374 aaPredicted RBP10.4□□□□□ -0.75
TRPS1-201ENST00000220888 PCYOX1Q9UHG3 505 aa10.4□□□□□ -0.75
TRPS1-201ENST00000220888 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.75
TRPS1-201ENST00000220888 TNFRSF11BO00300 401 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 PLOD3O60568 738 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 ALPIP09923 528 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 CLCNKAP51800 687 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 PPIDQ08752 370 aaKnown RBP10.39□□□□□ -0.75
TRPS1-201ENST00000220888 CHAF1BQ13112 559 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 CRY2Q49AN0 593 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 IL23RQ5VWK5 629 aa10.39□□□□□ -0.75
TRPS1-201ENST00000220888 BRAT1Q6PJG6 821 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms