RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 UBE2R2Q712K3 238 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ANKRD13BQ86YJ7 626 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PGBD3Q8N328 593 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MARVELD2Q8N4S9 558 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZBTB8BQ8NAP8 495 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 SUN5Q8TC36 379 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SUSD6Q92537 303 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FBXL18Q96ME1 805 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PCDHB18PQ96TA0 734 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 EBF3Q9H4W6 596 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF696Q9H7X3 374 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FAM198AQ9UFP1 575 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CNOT6Q9ULM6 557 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 TDRKHQ9Y2W6 561 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 MFSD11O43934 449 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RASAL1O95294 804 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MMP3P08254 477 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CD247P20963 164 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 F8A1P23610 371 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ASPAP45381 313 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CBX5P45973 191 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF33BQ06732 778 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SPCS2Q15005 226 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TSTD2Q5T7W7 516 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SNX20Q7Z614 316 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 LHFPL3Q86UP9 236 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TTC29Q8NA56 475 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 IL31RAQ8NI17 732 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 BHMTQ93088 406 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 LRRC58Q96CX6 371 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FCRL2Q96LA5 508 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 LENG8Q96PV6 779 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 TMEM27Q9HBJ8 222 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MAFFQ9ULX9 164 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CACNB4O00305 520 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 XKRYO14609 159 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 INSIG1O15503 277 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 OR10H2O60403 315 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SLC19A2O60779 497 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZBTB11O95625 1053 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 EPOP01588 193 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 APOC1P02654 83 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 UGT2B4P06133 528 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CYP2B6P20813 491 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MNDAP41218 407 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GRIA1P42261 906 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CCR10P46092 362 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ATN1P54259 1190 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 CBLBQ13191 982 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 IKBKEQ14164 716 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 KCTD19Q17RG1 926 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZIK1Q3SY52 487 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 CDCA2Q69YH5 1023 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ERMP1Q7Z2K6 904 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF567Q8N184 647 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 OR52K2Q8NGK3 314 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 RNASE11Q8TAA1 199 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 COPS4Q9BT78 406 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ITPAQ9BY32 194 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DERL2Q9GZP9 239 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 GTF2IRD1Q9UHL9 959 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 MGAT4AQ9UM21 535 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 A0A1W2PP18 115 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FAM172BPA6NC97 362 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ARCN1P48444 511 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 RPP38P78345 283 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 DLG2Q15700 870 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 TIGD6Q17RP2 521 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 PERM1Q5SV97 790 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.35□□□□□ -1.71
CHD9-201ENST00000219084 MEDAGQ5VYS4 303 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 KLHL24Q6TFL4 600 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZDHHC24Q6UX98 284 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 COMMD2Q86X83 199 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SPPL2CQ8IUH8 684 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CAMKK1Q8N5S9 505 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF614Q8N883 585 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZNF781Q8N8C0 355 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 INO80EQ8NBZ0 244 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 TMEM174Q8WUU8 243 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ELMO3Q96BJ8 720 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SLC45A3Q96JT2 553 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ZBTB45Q96K62 511 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 SIX2Q9NPC8 291 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 FAM120CQ9NX05 1096 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 SIRPGQ9P1W8 387 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 OGDHLQ9ULD0 1010 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 YLPM1P49750 1951 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 ACSL4O60488 711 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 UBXN7O94888 489 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CELF2O95319 508 aaKnown RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 PRNPP04156 253 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ITGB5P18084 799 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 ARF4P18085 180 aaPredicted RBP4.35□□□□□ -1.71
CHD9-201ENST00000219084 GPR1P46091 355 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SNAPC1Q16533 368 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 DEF8Q6ZN54 512 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 CHST9Q7L1S5 443 aa4.35□□□□□ -1.71
CHD9-201ENST00000219084 SLC34A3Q8N130 599 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms