RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 FAM160A2Q8N612 972 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 OR14C36Q8NHC7 312 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 PPP4R1Q8TF05 950 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 TRIM55Q9BYV6 548 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 NPHS2Q9NP85 383 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
PHGDH-221ENST00000641573 DNAJC16Q9Y2G8 782 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
PHGDH-221ENST00000641573 SYCE1LA8MT33 242 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SUPT3HB4E1H0 165 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 UBXN8O00124 270 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 QSOX1O00391 747 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 NPHS1O60500 1241 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SUPT3HO75486 399 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 IPO13O94829 963 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 KCNK5O95279 499 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 FTH1P02794 183 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 CBSLP0DN79 551 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 C7P10643 843 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 AOAHP28039 575 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 CCR7P32248 378 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 CBSP35520 551 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 NFKB2Q00653 900 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM115Q12893 351 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 RCN2Q14257 317 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 LRRC32Q14392 662 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 AGERQ15109 404 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SF3A2Q15428 464 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 STPG1Q5TH74 334 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 KIAA1324Q6UXG2 1013 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 ADAMTSL4Q6UY14 1074 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 ATG14Q6ZNE5 492 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 MYO1HQ8N1T3 1032 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SPEM1Q8N4L4 309 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 RASGEF1AQ8N9B8 481 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 PLA2G15Q8NCC3 412 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 RFWD2Q8NHY2 731 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 FUBP1Q96AE4 644 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 PHF21BQ96EK2 531 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 MOCOSQ96EN8 888 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 MRGPRX1Q96LB2 322 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 SORT1Q99523 831 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 DRC3Q9H069 523 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
PHGDH-221ENST00000641573 NCKAP1Q9Y2A7 1128 aa12.88□□□□□ -0.35
PHGDH-221ENST00000641573 ASPMQ8IZT6 3477 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 SPEGQ15772 3267 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 A0A1W2PQU0 124 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 OR2AG2A6NM03 316 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TM4SF5O14894 197 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 KPNA5O15131 536 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 PCCBP05166 539 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 CHRNB1P11230 501 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ACADMP11310 421 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 MTHFD2P13995 350 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 GFAPP14136 432 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 NDUFV2P19404 249 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 IMPDH1P20839 514 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 CTSCP53634 463 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ADPRHP54922 357 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
PHGDH-221ENST00000641573 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 CFAP157Q5JU67 520 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 PLEKHS1Q5SXH7 462 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 PNCKQ6P2M8 343 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM220Q6QAJ8 160 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 CYHR1Q6ZMK1 362 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 USP30Q70CQ3 517 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ADGRG6Q86SQ4 1221 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TRIM74Q86UV6 250 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 GPSM1Q86YR5 675 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ELMO1Q92556 727 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 HIC2Q96JB3 615 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 CNDP1Q96KN2 507 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM237Q96Q45 408 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ZCCHC2Q9C0B9 1178 aaKnown RBP12.87□□□□□ -0.35
PHGDH-221ENST00000641573 ARRDC1-AS1Q9H2J1 176 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms