RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 LMAN1P49257 510 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 TDGF1P3P51864 188 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 CDH6P55285 790 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 GSCP56915 257 aaPredicted RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 SOX8P57073 446 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 FOXL2P58012 376 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ARG2P78540 354 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 RBPJQ06330 500 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ERMARDQ5T6L9 678 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 MEX3BQ6ZN04 569 aaKnown RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ZNF547Q8IVP9 402 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 RAVER1Q8IY67 606 aaKnown RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 GPR135Q8IZ08 494 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 CATSPER1Q8NEC5 780 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ANKRD20A12PQ8NF67 263 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 OR2Y1Q8NGV0 311 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 TEKT4Q8WW24 435 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 PTERQ96BW5 349 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 TIGD1Q96MW7 591 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 TTC25Q96NG3 672 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 PEBP4Q96S96 227 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 NDC1Q9BTX1 674 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ZSCAN5AQ9BUG6 496 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 TDRD1Q9BXT4 1180 aaKnown RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 STK33Q9BYT3 514 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 POLR1EQ9GZS1 481 aaKnown RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 KLHL25Q9H0H3 589 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 NDST4Q9H3R1 872 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 ZWILCHQ9H900 591 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 PCDH9Q9HC56 1237 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 SYTL2Q9HCH5 934 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 SLC6A20Q9NP91 592 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 SEMA3GQ9NS98 782 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 IRAK4Q9NWZ3 460 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 CWC15Q9P013 229 aaKnown RBP7.62□□□□□ -1.19
PHGDH-217ENST00000641455 SEC14L3Q9UDX4 400 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 CDYLQ9Y232 598 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 PCM1Q15154 2024 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 NUP210LQ5VU65 1888 aa7.62□□□□□ -1.19
PHGDH-217ENST00000641455 NIPBLQ6KC79 2804 aaeCLIP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 RGSL1A5PLK6 1076 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ATMINO43313 823 aaPredicted RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 VEGFDO43915 354 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 PRPSAP2O60256 369 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 UQCRHP07919 91 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CD63P08962 238 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 MTHFD1P11586 935 aaKnown RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 UNGP13051 313 aaPredicted RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 AMPD1P23109 780 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ARL4AP40617 200 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ADORA2A-AS1P86434 159 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 OGDHQ02218 1023 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 DPYSQ14117 519 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 GALNT3Q14435 633 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 KRT33BQ14525 404 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CLEC16AQ2KHT3 1053 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.61□□□□□ -1.195e-8■■■□□ 19.2
PHGDH-217ENST00000641455 VWA3BQ502W6 1294 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ZNF789Q5FWF6 425 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 RPUSD3Q6P087 351 aaKnown RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 IGFL2Q6UWQ7 119 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ISLR2Q6UXK2 745 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 AMZ2Q86W34 360 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 PHF13Q86YI8 300 aaPredicted RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CARFQ8N187 725 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 TRAM1L1Q8N609 369 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 GPR26Q8NDV2 337 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CHDHQ8NE62 594 aaPredicted RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 THOC3Q96J01 351 aaKnown RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 C12orf66Q96MD2 445 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 PCDHB18PQ96TA0 734 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 NUP85Q9BW27 656 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 NAA15Q9BXJ9 866 aaKnown RBP7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CLSTN2Q9H4D0 955 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 DEF6Q9H4E7 631 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 C1GALT1Q9NS00 363 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 HAUS2Q9NVX0 235 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 RWDD2AQ9UIY3 292 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ZDHHC9Q9Y397 364 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 ANKRD12Q6UB98 2062 aa7.61□□□□□ -1.19
PHGDH-217ENST00000641455 PRRC2AP48634 2157 aaKnown RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 DYTNA2CJ06 578 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 RNF8O76064 485 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 UMODP07911 640 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 ST6GAL1P15907 406 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 KLK2P20151 261 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 SERPINB6P35237 376 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 SOX5P35711 763 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 ZNF135P52742 658 aaPredicted RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 RPL26P61254 145 aaKnown RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 CSNK1G2P78368 415 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 DCDP81605 110 aaKnown RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 SRSF11Q05519 484 aaKnown RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 NFE2L1Q14494 772 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 QPCTQ16769 361 aa7.6□□□□□ -1.19
PHGDH-217ENST00000641455 KHDC1Q4VXA5 237 aaKnown RBP7.6□□□□□ -1.19
PHGDH-217ENST00000641455 HSP90AA4PQ58FG1 418 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms