RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 IL26Q9NPH9 171 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 PCDHGB7Q9Y5F8 929 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 CENPEQ02224 2701 aa14.63□□□□□ -0.07
SYNE2-228ENST00000639659 HIVEP3Q5T1R4 2406 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 ITPR2Q14571 2701 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 SSU72P8A0A1W2PR75 194 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 SLC9B1P1A6NJY1 282 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 KCNJ13O60928 360 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CEACAM4O75871 244 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 POLBP06746 335 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CA5AP35218 305 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CHRNA4P43681 627 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 RRADP55042 308 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 DMPKQ09013 629 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 ELOAQ14241 798 aaKnown RBP14.62□□□□□ -0.07
SYNE2-228ENST00000639659 FAM198BQ6UWH4 519 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 GLT6D1Q7Z4J2 308 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 IQCKQ8N0W5 287 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CISD2Q8N5K1 135 aaKnown RBP14.62□□□□□ -0.07
SYNE2-228ENST00000639659 OR4E2Q8NGC2 313 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 OR8K5Q8NH50 307 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CTNNBL1Q8WYA6 563 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-228ENST00000639659 C5orf34Q96MH7 638 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
SYNE2-228ENST00000639659 PACSIN1Q9BY11 444 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 NLNQ9BYT8 704 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 DEF6Q9H4E7 631 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 ASF1BQ9NVP2 202 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 SLC24A2Q9UI40 661 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 PKP3Q9Y446 797 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 SPTBP11277 2137 aa14.62□□□□□ -0.07
SYNE2-228ENST00000639659 CRYBG3Q68DQ2 2970 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 C9J4A7 227 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 GOLGA6L22H0YM25 854 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 RAB40ALP0C0E4 278 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 NFKB1P19838 968 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 VARSP26640 1264 aaKnown RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 HMGCLP35914 325 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 PREPP48147 710 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 LMAN1P49257 510 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 WNT3AP56704 352 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 LONRF2Q1L5Z9 754 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 SIRPB2Q5JXA9 342 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 MED25Q71SY5 747 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 RAB43Q86YS6 212 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 SRRM1Q8IYB3 904 aaKnown RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 ZBTB2Q8N680 514 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 TMEM102Q8N9M5 508 aaPredicted RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 DDHD1Q8NEL9 900 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 OR1L3Q8NH93 324 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 SNRNP40Q96DI7 357 aaKnown RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 ILKAPQ9H0C8 392 aaPredicted RBP14.61□□□□□ -0.07
SYNE2-228ENST00000639659 UVRAGQ9P2Y5 699 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 BTRCQ9Y297 605 aa14.61□□□□□ -0.07
SYNE2-228ENST00000639659 LDB2O43679 373 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 LDLRP01130 860 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 H2AFZP0C0S5 128 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 PTPN3P26045 913 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 HNRNPH3P31942 346 aaKnown RBP14.6□□□□□ -0.07
SYNE2-228ENST00000639659 ITGA9Q13797 1035 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 PTPRCAPQ14761 206 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 NR1I3Q14994 352 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 NCF4Q15080 339 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 LLGL1Q15334 1064 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 PLEKHN1Q494U1 663 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-228ENST00000639659 TEX44Q53QW1 395 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 FIGNQ5HY92 759 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 VWA5B1Q5TIE3 1220 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 ZDHHC20Q5W0Z9 365 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 METRNLQ641Q3 311 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 SLC9A4Q6AI14 798 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 H2AFVQ71UI9 128 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 DAAM2Q86T65 1068 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 IPMKQ8NFU5 416 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 N4BP2L2Q92802 583 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-228ENST00000639659 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 RMDN2Q96LZ7 410 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 BPIFA3Q9BQP9 254 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 XPO4Q9C0E2 1151 aaKnown RBP14.6□□□□□ -0.07
SYNE2-228ENST00000639659 KIR3DX1Q9H7L2 352 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 LATS2Q9NRM7 1088 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 KLHL8Q9P2G9 620 aaPredicted RBP14.6□□□□□ -0.07
SYNE2-228ENST00000639659 FAM153AQ9UHL3 310 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 SLC5A6Q9Y289 635 aa14.6□□□□□ -0.07
SYNE2-228ENST00000639659 CELSR2Q9HCU4 2923 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 PIKFYVEQ9Y2I7 2098 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 A0A1W2PQJ5 194 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 ANKUB1A6NFN9 424 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 MGAT4DA6NG13 374 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 MAP3K7O43318 606 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 PRAMEF1O95521 474 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 PVRP15151 417 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 RORAP35398 523 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 ZBED6P86452 979 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 SLC14A2Q15849 920 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 C1orf189Q5VU69 101 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 MLIPQ5VWP3 458 aa14.59□□□□□ -0.07
SYNE2-228ENST00000639659 LYPLAL1Q5VWZ2 237 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms