RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZRANB3Q5FWF4 1079 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 C16orf46Q6P387 395 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 TAS2R42Q7RTR8 314 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 NXPE1Q8N323 547 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 HM13Q8TCT9 377 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 KLHL6Q8WZ60 621 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 CD180Q99467 661 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 C19orf43Q9BQ61 176 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 CCM2Q9BSQ5 444 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 SPRY4Q9C004 299 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 STARD5Q9NSY2 213 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.4
PNKP-225ENST00000636214 PACSIN2Q9UNF0 486 aaPredicted RBP17.52■□□□□ 0.4
PNKP-225ENST00000636214 TLCD2A6NGC4 264 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 IFRD1O00458 451 aaPredicted RBP17.51■□□□□ 0.39
PNKP-225ENST00000636214 NKX2-8O15522 239 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 FTCDO95954 541 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 GAS8O95995 478 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 POLBP06746 335 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 MC4RP32245 332 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 CA5AP35218 305 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 DLSTP36957 453 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 PRLHRP49683 370 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 POLE2P56282 527 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 KCNAB2Q13303 367 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 GPR33Q49SQ1 333 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 TMTC4Q5T4D3 741 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 ATG14Q6ZNE5 492 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 KMT5CQ86Y97 462 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 CFAP206Q8IYR0 622 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 GALNT6Q8NCL4 622 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
PNKP-225ENST00000636214 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 ARNT2Q9HBZ2 717 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 HRASLS2Q9NWW9 162 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 IL17BQ9UHF5 180 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 KCND3Q9UK17 655 aa17.51■□□□□ 0.39
PNKP-225ENST00000636214 OR5K3A6NET4 321 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 SPAG6O75602 509 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 ZIC2O95409 532 aaPredicted RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 FGF5P12034 268 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 ATP1B2P14415 290 aaPredicted RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 XIAPP98170 497 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 DUS1LQ6P1R4 473 aaKnown RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 LINC00523Q86TU6 105 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 BPHLQ86WA6 291 aaPredicted RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 NAT14Q8WUY8 206 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 RNF31Q96EP0 1072 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 DNAJC1Q96KC8 554 aaKnown RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
PNKP-225ENST00000636214 MAP3K3Q99759 626 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 KIR3DX1Q9H7L2 352 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 SOHLH2Q9NX45 425 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 SLC24A2Q9UI40 661 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 TUBD1Q9UJT1 453 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 CROTQ9UKG9 612 aa17.5■□□□□ 0.39
PNKP-225ENST00000636214 PIKFYVEQ9Y2I7 2098 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 IGHV5-51A0A0C4DH38 117 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 OR6C74A6NCV1 312 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 KATNA1O75449 491 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 LMAN1P49257 510 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 PPP1CAP62136 330 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 DEFB109BQ30KR1 87 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 DENND5AQ6IQ26 1287 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 APOBEC4Q8WW27 367 aaKnown RBP17.49■□□□□ 0.39
PNKP-225ENST00000636214 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.49■□□□□ 0.39
PNKP-225ENST00000636214 SLC41A2Q96JW4 573 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 FANCEQ9HB96 536 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 ZDHHC3Q9NYG2 299 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 PADI1Q9ULC6 663 aa17.49■□□□□ 0.39
PNKP-225ENST00000636214 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 MATN2O00339 956 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 CCL22O00626 93 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 MAP3K7O43318 606 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 LDB2O43679 373 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 ZNF28P17035 718 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 TPH1P17752 444 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 ACRV1P26436 265 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 CDC25BP30305 580 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 HSD11B2P80365 405 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 NFKB2Q00653 900 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 POU6F1Q14863 301 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 CRTC2Q53ET0 693 aaPredicted RBP17.48■□□□□ 0.39
PNKP-225ENST00000636214 SERPINA9Q86WD7 417 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 DNAAF3Q8N9W5 541 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 ACVR1CQ8NER5 493 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
PNKP-225ENST00000636214 STYXQ8WUJ0 223 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 FCRL4Q96PJ5 515 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 SRMSQ9H3Y6 488 aa17.48■□□□□ 0.39
PNKP-225ENST00000636214 NLE1Q9NVX2 485 aaPredicted RBP17.48■□□□□ 0.39
PNKP-225ENST00000636214 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
PNKP-225ENST00000636214 AGAP14A8MT82 685 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms