RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SAGE2PA6NJ88 616 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 BTN3A1O00481 513 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 OR4F21O95013 312 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 MOCS2O96007 188 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 GSNP06396 782 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 IL1RNP18510 177 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 IL5RAQ01344 420 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 UGT3A1Q6NUS8 523 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 FAM171BQ6P995 826 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 TUBA3EQ6PEY2 450 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 DCP2Q8IU60 420 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 FAM86B1Q8N7N1 296 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 TXNDC15Q96J42 360 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 SERPINB11Q96P15 392 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 ZBTB18Q99592 522 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 ACBD6Q9BR61 282 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 DUSP21Q9H596 190 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 CARS2Q9HA77 564 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 LTB4R2Q9NPC1 389 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 CCNB1IP1Q9NPC3 277 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 KCNH4Q9UQ05 1017 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 FAM50BQ9Y247 325 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 ARL5AQ9Y689 179 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 LTBP3Q9NS15 1303 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 H0Y626 953 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 CDC7O00311 574 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 TRIM16O95361 564 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 RETP07949 1114 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 G6PDP11413 515 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 SMPD1P17405 629 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 AKT1P31749 480 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 AGTR2P50052 363 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 IHHQ14623 411 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 HABP4Q5JVS0 413 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 HS3ST5Q8IZT8 346 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 THUMPD3Q9BV44 507 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 ERVW-1Q9UQF0 538 aa14.59□□□□□ -0.07
CACNA1A-220ENST00000635988 NPEPPSL1A6NEC2 478 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 TTC34A8MYJ7 566 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 CXCR6O00574 342 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 CRYBB1P53674 252 aaPredicted RBP14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 VBP1P61758 197 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 CYP4F3Q08477 520 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 NPTX1Q15818 432 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 NKG7Q16617 165 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 LRRC8DQ7L1W4 858 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 AKAP14Q86UN6 197 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 METTL23Q86XA0 190 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 SNX29P2Q8IUI4 249 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 SLC13A3Q8WWT9 602 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 NSMCE3Q96MG7 304 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 ZYG11BQ9C0D3 744 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 TMEM248Q9NWD8 314 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 VPS9D1Q9Y2B5 631 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 UGT2A1Q9Y4X1 527 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 PCDHGA10Q9Y5H3 936 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 PMF1-BGLAPU3KQ54 211 aa14.58□□□□□ -0.07
CACNA1A-220ENST00000635988 NCF1BA6NI72 391 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 NCF1CA8MVU1 366 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 AREL1O15033 823 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 ANKRD28O15084 1053 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 RECQL5O94762 991 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 THP07101 528 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 ODC1P11926 461 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 NCF1P14598 390 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 FMO4P31512 558 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 PBX3P40426 434 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 CLCNKBP51801 687 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 HUNKP57058 714 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 SLC35A2P78381 396 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 PLEKHG6Q3KR16 790 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 FBXO48Q5FWF7 155 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 THOC7Q6I9Y2 204 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 DSG4Q86SJ6 1040 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 GPSM1Q86YR5 675 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 PLD3Q8IV08 490 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 NAT16Q8N8M0 369 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 OR13C4Q8NGS5 318 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 PDGFDQ9GZP0 370 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 POLR1EQ9GZS1 481 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 DSN1Q9H410 356 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 ACTL8Q9H568 366 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 VAPAQ9P0L0 249 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 ERVK-18Q9QC07 812 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 IKZF3Q9UKT9 509 aa14.58□□□□□ -0.08
CACNA1A-220ENST00000635988 TAF4O00268 1085 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 E2F3O00716 465 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 ENPP3O14638 875 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 PRMT5O14744 637 aaPredicted RBP14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 XPNPEP2O43895 674 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 NUAK1O60285 661 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 DFNA5O60443 496 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 VPS26AO75436 327 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 NDUFS3O75489 264 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 UPK1BO75841 260 aa14.57□□□□□ -0.08
CACNA1A-220ENST00000635988 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms