RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CD1EP15812 388 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 GABRG2P18507 467 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 GABRB3P28472 473 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ARRB1P49407 418 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 METAP1P53582 386 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 DAB2P98082 770 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 IRF9Q00978 393 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 ZNF648Q5T619 568 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 LYSMD4Q5XG99 296 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 FBXL6Q8N531 539 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 TEX9Q8N6V9 391 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 PIH1D2Q8WWB5 315 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 FAM129BQ96TA1 746 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 DKK3Q9UBP4 350 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 SUSD2Q9UGT4 822 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 CDYLQ9Y232 598 aa12.28□□□□□ -0.44
SYNGAP1-207ENST00000628646 KRT36O76013 467 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 BAG2O95816 211 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 BPIP17213 487 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 COL9A1P20849 921 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 NSG1P42857 185 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 CPA2P48052 419 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 IL2P60568 153 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 DENND5AQ6IQ26 1287 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 SLC30A9Q6PML9 568 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 CAMKK1Q8N5S9 505 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 C1orf21Q9H246 121 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 DCLRE1BQ9H816 532 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 RNF112Q9ULX5 631 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 ASF1AQ9Y294 204 aa12.27□□□□□ -0.44
SYNGAP1-207ENST00000628646 SPTBN2O15020 2390 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 H3BM21 787 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 GMNNO75496 209 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 THEGLP0DJG4 465 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 IDSP22304 550 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 MAP7Q14244 749 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 PTK2BQ14289 1009 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 PNPOQ9NVS9 261 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZNF212Q9UDV6 495 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 VWA7Q9Y334 891 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 CACNA1IQ9P0X4 2223 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 CTSLP07711 333 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ARNTP27540 789 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC1A2P43004 574 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 KIR2DL1P43626 348 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ARSDP51689 593 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 POU4F1Q01851 419 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 C1orf146Q5VVC0 180 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 DPPA4Q7L190 304 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 SYTL1Q8IYJ3 562 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 FRS2Q8WU20 508 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATOH1Q92858 354 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ANKRD27Q96NW4 1050 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 CAB39LQ9H9S4 337 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZDHHC3Q9NYG2 299 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 WWOXQ9NZC7 414 aa12.27□□□□□ -0.45
SYNGAP1-207ENST00000628646 LOC285095A0A1B0GVY8 99 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 TARM1B6A8C7 271 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 BTN3A1O00481 513 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 C2P06681 752 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 DGKAP23743 735 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 IDH3AP50213 366 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 BTKQ06187 659 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 C1orf61Q13536 156 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 FAM45BPQ6NSW5 357 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 EFL1Q7Z2Z2 1120 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 PNPLA1Q8N8W4 532 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 FAM46DQ8NEK8 389 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 FAM45AQ8TCE6 357 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 GLYATL1Q969I3 302 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 AHCYL2Q96HN2 611 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 HIC2Q96JB3 615 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 KIFC1Q9BW19 673 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 CHRDQ9H2X0 955 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 NLE1Q9NVX2 485 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 FADS3Q9Y5Q0 445 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 NOTCH4Q99466 2003 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 GREB1Q4ZG55 1949 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 CR2P20023 1033 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 COPAP53621 1224 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 AP2B1P63010 937 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 ASZ1Q8WWH4 475 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 FATE1Q969F0 183 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 CLPTM1LQ96KA5 538 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 TMEM245Q9H330 911 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 PREBQ9HCU5 417 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 KCNK6Q9Y257 313 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 A0A088AWK7 358 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 PTGER3P43115 390 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 PGGT1BP53609 377 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 RAB10P61026 200 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 NFATC2Q13469 925 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 RFLNAQ6ZTI6 216 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 SPATA6LQ8N4H0 392 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms